Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00081 ATGGCTATGTCTACTATTTTGCTTTTGACTTTCTTTTCTTTCATTTATGGCAGTGCAGCTACTCATCACGTTTATAGAAATCTTCAGAGTTTATCTTCTGATTCCTCCAACCAACCTTACAGAACTGCTTATCACTTCCAACCTCCCAAGAATTGGATAAATGatcccaatgGACCATTgagatatgcaggactttaccacctattctatcaatacaatcctaaaggtgcagtttggggaaatattgtgtgggcacattcagtgtcaaaggatcttgtgaattggactccactagatcctgccatttttccatctcaaccgtccgatataaatggctgttggtcaggatcaaccacactacttcctgggaacaaaccagttattctatacactggaattgacctattgaatcagcaagttcaaaacttggcccaacccaaaaatttgtctgacccatttcttagggaatgggtcaagtcccccaaaaatcctctaatggcaccaactagtgctaacaagatcaattcaagttcatttagagaccccaccactgcttggctaggcaaagatgggcattggagggtacttgttggaagcaaaagaagaactaggggaatcgcaattttgtataggagcaaagactttgttaattgggttcaagccaaacaccctttgtattcaatcctaggaagtggcatgtgggagtgtcctgattttttccctgtttTGAATAATGACCAATTGGGTGTTGACACGTCGGTGAATGGTTATGATGTTAGGCACGTGCTCAAGGTTAGCTTGGATGACAAAAAACATGATTACTATATGATTGGGAGTTACAATGCTGCCAAGGATGCATTTATCCCGGATGAAGAGTCTAATGAATTTGTTTTAAGATATGACTATGGAAAATACTATGCCTCAAAAACTTTCTTTGATGATGGGAAGAAGAGAAGGATTttgttagggtgggctaatgaatcctctagtgttgctgctgatatcaagaagggatggtctggaatccatACAATTCCAAGGGCTTTATGGCTGCATAAGTCTGGTAAACAGTTGGTACAGTGGCCAGTGGTGGAAGTTGAAAAGCTACGTGCATACCCAGTCAACTTGCCCCCCCAAGTGCTAAAAGGAGGCAAGTTGCTTCCAATTAATGGTGTCACAGCAACACAGGCCGATGTTGAAATTTCATTTGAAGTGAGTAATTTGAGAGAGGCTGAAGTATTGGACTATTGGACAGACCCCCAAATTCTGTGTAGTAAAAAGGGTTCATCCATCAAAAGTGGACTGGGCCCATTTGGTCTGTTAGTTTTTGCTTCAGAGGGTTTGCAAGAGTATACATCAGTTTTCTTCAGAATATTCAGACACCAACACAAATATTTGGTGCTCTTGTGCAGTGATCAAAGCAGGTCTTCCTTAAACAAAGACAATGATTTGACCAGTTATGGAACTTTTGTGGACGTCGACCCTCTTCATGAGAAGCTATCATTGAGAACCTTGATTGATCATTCTGTCGTGGAGAGTTTTGGAGGAGAAGGAAGGGCTTGCATCACGGCTAGAGTTTATCCCACATTAGCAATCAATGATGAAGCACAACTATATGCTTTCAATAATGGAACTGCTGATGTCAACATCACAAAACTGAATGCTTGGAGCATGAAGAAAGCACAGATAAATTGA 1695 0.2537 MAMSTILLLTFFSFIYGSAATHHVYRNLQSLSSDSSNQPYRTAYHFQPPKNWINDPNGPLRYAGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDPAIFPSQPSDINGCWSGSTTLLPGNKPVILYTGIDLLNQQVQNLAQPKNLSDPFLREWVKSPKNPLMAPTSANKINSSSFRDPTTAWLGKDGHWRVLVGSKRRTRGIAILYRSKDFVNWVQAKHPLYSILGSGMWECPDFFPVLNNDQLGVDTSVNGYDVRHVLKVSLDDKKHDYYMIGSYNAAKDAFIPDEESNEFVLRYDYGKYYASKTFFDDGKKRRILLGWANESSSVAADIKKGWSGIHTIPRALWLHKSGKQLVQWPVVEVEKLRAYPVNLPPQVLKGGKLLPINGVTATQADVEISFEVSNLREAEVLDYWTDPQILCSKKGSSIKSGLGPFGLLVFASEGLQEYTSVFFRIFRHQHKYLVLLCSDQSRSSLNKDNDLTSYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTLAINDEAQLYAFNNGTADVNITKLNAWSMKKAQIN 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00081 564 PANTHER CELL-WALL INVERTASE 2 564 - -
Gma07g00081 564 ProSitePatterns Glycosyl hydrolases family 32 active site. 45 58 IPR018053 GO:0004553|GO:0005975
Gma07g00081 564 Gene3D Glycosyl hydrolase domain; family 43 49 372 IPR023296 -
Gma07g00081 564 SUPERFAMILY Concanavalin A-like lectins/glucanases 362 560 IPR013320 -
Gma07g00081 564 CDD GH32_Fruct1-like 51 351 - -
Gma07g00081 564 SMART glyco_32 45 518 IPR001362 GO:0004553|GO:0005975
Gma07g00081 564 Gene3D - 373 558 - -
Gma07g00081 564 Pfam Glycosyl hydrolases family 32 C terminal 365 557 IPR013189 -
Gma07g00081 564 SUPERFAMILY Arabinanase/levansucrase/invertase 36 363 IPR023296 -
Gma07g00081 564 Pfam Glycosyl hydrolases family 32 N-terminal domain 45 362 IPR013148 -
Gma07g00081 564 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00081 Gma-Chr7 659380 664218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00081 62 564 Glycoside Hydrolase AT3G13790 65.107 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00081 K01193 - gmx:547681 1141.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00081 07 659380 664218 Gma08g01772 08 15761590 15766341 GST
Gma13g03132 13 45468086 45471452 Gma07g00081 07 659380 664218 PCT
Gma15g00233 15 2045703 2049308 Gma07g00081 07 659380 664218 PCT
Gma07g00081 07 659380 664218 Gma13g03132 13 45468086 45471452 PCT
Gma07g00081 07 659380 664218 Gma15g00233 15 2045703 2049308 PCT