Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03132 ATGGCCATATCTCCAATTTTGTTGTTGGCTATCTTATCTCTCATTTATGGCAATGGTGTTCTTCCCATTGAAGCTACCCATCATGTTTACAGAAATCTTCAGACTCTATCTTCTGATTCCTCTGATCAACCTTATAGAACTGCTTACCATTTCCAACCTCGCAAAAATTGGATAAATGaccctaatggaccaatgaggtacaaaggactttaccatctgttctatcaatacaatccaaaaggtgccgtatggggcaatattgtctgggcccactcaatatcaaatgatcttgtgaattggactccactggatcatgccatctacccttctcaaccgtctgatataaacggttgttggtcaggctcagccacaatactccctgggggcaagccagccattttatacacaggaattaaccctaataagcaccaagttcaaaacttagccatacccaaaaacatgtctgacccattacttagggaatgggttaagtcacccaaaaatccactaatggcaccaactagttctaacaatatcaattcaagctcatttagggaccctaccactgcttggctaggaaaagatggatactggagggtgctgattggaagcaaaatacacactaggggtatggcaattttgtacaagagcaaaaactttgttaattgggttcaagccaaacaacccctacattcagctgaaggcactggaatgtgggagtgccctgatttctatccagtGCTGGATAATAAGGGCCCATCAACTATTGGTCTTGACACATCTGTGAATGGTGATAATGTTAGGCATGTGCTTAAGGTTAGTTTGGATGATACAAAACATGATCATTATTTGATTGGGACTTATGACATTGCCAAGGATATCTTCACTCCGGATAACGGATTTGAGGATAGCCAAACTGTCTTAAGATATGACTATGGAAAATATTATGCCTCAAAAACGATTTTTGAAGATGGAAAAAACAGAAGGgtcttattgggttgggttaacgaatcctcaagtgttccggatgatatcaagaaaggatgggctggaatccataccattccaaggGCCATCTGGCTTCATAAATCTGGGAAACAGTTGGTGCAATGGCCGGTGGTGGAACTTGAAAGCTTGCGTGTGAACCCTGTCCACTGGCCCACCAAAGTGGTCAAAGGTGGTGAAATGCTTCAAGTTACTGGTGTCACTGCGGCACAGGCTGACGTTGAAATTTCATTTGAAGTGAATGAGTTTGGAAAGGCCGAAGTATTGGACAAATGGGTGGATCCCCAAATTCTGTGTAGTAGAAAGGGGGCAGCCGTAAAGGGTGGTTTGGGACCCTTTGGCTTGCTAGTTTTTGCTTCTCGTGGCTTACAAGAGTACACGGCAGTGTTCTTTAGAATATTCAGATACCAAAATAAAAATTTGGTTCTCATGTGTAGCGACCAAAGCAGATCCTCTTTGAATAAAGATAACGATATGACCACCTATGGGACTTTTGTGGACATGGACCCTCTTCATGAGAAGCTGTCACTAAGAACTTTGATTGATCGCTCAGTAGTGGAGAGTTTTGGAGGAGAGGGAATGGCTTGCATCACAGCCAGAGTATATCCCACAATAGCAATTAATAAAAAGGCACAACTATATGCTTTCAATAATGGAACTGCCGCTGTCAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAGGCAAAAATCAACTGA 1725 0.2603 MAISPILLLAILSLIYGNGVLPIEATHHVYRNLQTLSSDSSDQPYRTAYHFQPRKNWINDPNGPMRYKGLYHLFYQYNPKGAVWGNIVWAHSISNDLVNWTPLDHAIYPSQPSDINGCWSGSATILPGGKPAILYTGINPNKHQVQNLAIPKNMSDPLLREWVKSPKNPLMAPTSSNNINSSSFRDPTTAWLGKDGYWRVLIGSKIHTRGMAILYKSKNFVNWVQAKQPLHSAEGTGMWECPDFYPVLDNKGPSTIGLDTSVNGDNVRHVLKVSLDDTKHDHYLIGTYDIAKDIFTPDNGFEDSQTVLRYDYGKYYASKTIFEDGKNRRVLLGWVNESSSVPDDIKKGWAGIHTIPRAIWLHKSGKQLVQWPVVELESLRVNPVHWPTKVVKGGEMLQVTGVTAAQADVEISFEVNEFGKAEVLDKWVDPQILCSRKGAAVKGGLGPFGLLVFASRGLQEYTAVFFRIFRYQNKNLVLMCSDQSRSSLNKDNDMTTYGTFVDMDPLHEKLSLRTLIDRSVVESFGGEGMACITARVYPTIAINKKAQLYAFNNGTAAVKITRLSAWSMKKAKIN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03132 574 SUPERFAMILY Concanavalin A-like lectins/glucanases 372 570 IPR013320 -
Gma13g03132 574 ProSitePatterns Glycosyl hydrolases family 32 active site. 50 63 IPR018053 GO:0004553|GO:0005975
Gma13g03132 574 PANTHER CELL-WALL INVERTASE 2 574 - -
Gma13g03132 574 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 574 - -
Gma13g03132 574 Gene3D Glycosyl hydrolase domain; family 43 55 382 IPR023296 -
Gma13g03132 574 SMART glyco_32 50 528 IPR001362 GO:0004553|GO:0005975
Gma13g03132 574 Gene3D - 383 568 - -
Gma13g03132 574 Pfam Glycosyl hydrolases family 32 N-terminal domain 50 372 IPR013148 -
Gma13g03132 574 CDD GH32_Fruct1-like 56 361 - -
Gma13g03132 574 Pfam Glycosyl hydrolases family 32 C terminal 375 567 IPR013189 -
Gma13g03132 574 SUPERFAMILY Arabinanase/levansucrase/invertase 41 373 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03132 Gma-Chr13 45468086 45471452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03132 65 574 Glycoside Hydrolase AT3G13790 63.900 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03132 K01193 - gmx:100783003 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03132 13 45468086 45471452 Gma15g00233 15 2045703 2049308 GST
Gma13g03132 13 45468086 45471452 Gma07g00081 07 659380 664218 PCT
Gma13g03132 13 45468086 45471452 Gma08g01772 08 15761590 15766341 PCT
Gma07g00081 07 659380 664218 Gma13g03132 13 45468086 45471452 PCT
Gma08g01772 08 15761590 15766341 Gma13g03132 13 45468086 45471452 PCT