Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00227 ATGGCGTTCATTGGTGCAGTCAAATTCTTGCTGCAGTACTTAGTTCTATTATGCCTCCTCAACTATctacctctttctcaagGTAAGCAGAACTGGAATGAAGGGTACCCATTTATAAGAAGAGCAAGTTCATTGGGTTATAATGGGAAAAGTGGAGGGTATGATTATATAATAGTGGGGGGTGGAACAGCAGGGTGTCCATTGGCTGCAACCCTGTCTCAGAAGTTCAAAGTTCTGCTGCTTGAAAGAGGAGGAGTCCCTTTCAACAACCCTAATGTGTCATTTCTGCACAACTTTCACATTACATTGGCAGACACTTCACCAACTTCGGCTTCTCAGTACTTCATTTCAACAGATGGAGTCCTCAATGCAAGGGGAAGGGTTTTGGGTGGTGGCAGTTCCATTAACGCTGGCTTCTACACTAGAGCAGACCCAAGATTTATAAGGAAGGTGGGGTGGGATACAAAGCTAGTGAATGAGTCATATCCTTGGGTTGAGAAGCAGATTGTTCACCGGCCAAAGTTTTCAGATTGGCAGAGAGCAGTTAGGGACGGGCTTCTAGCAGCTGGTGTGTCTCCTTTCAATGGCTTCACCTATGATCACAAGTACGGAACCAAAGTTGGTGGAACCATTTTTGACAGATTTGGCCGTCGCCACACAGCTGCTGAATTGCTTGCTTCTGCCAACCCTCACAAACTTACTGTTTTGATCCATGCCACTGTCCAAAACATTGTTTTTGATACAACAGGAAAAAGACCAAAAGCTACCGGGGTTATTTTCAAGGATGAAAATGGGAAGCAGCATGAGGCGTATCTAGGAAATGACAGGCAGAGTGAGGTGATTGTGTCTAGTGGGGCACTTGGGACTCCTCAATTGCTATTGCTGAGTGGAATTGGCCCAAAAGCAGAGCTTCAGAAATTGAACATCCCTGTGGTGCTTGACAACCAATTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACAATTTTTGTTCCTTCCAAAAGATCAGTTCAGCAGTCACTCATAGAAACTGTTGGTATTACCAATTTGGGTGTCTACATTGAGACCAGCAGTGGGTTTGGCCAGTCCAAAGACAGCATTCACTGCCACCATGGTATCTTGTCAGCTGAGATTGGACAGTTGTCCACAATTCCACCAAAGCAAAGATCACAAGAAGCTGTTAAAGCTTATGTGAAGAGCAAGAGAGACATACCAGTTGAAGCATTCAGGGGAGGGTTCATATTGTCAAAAGTTGCGAACCCTTGGTCAACAGGTGAGCTCAAGTTGAAAAACACCAACGTGGAGGACAACCCTGCTGTTACCTTCAACTACTTCAGCCACCCTTATGATCTTAGGCGCTGTGTGGAGGGTATTCGCTTGGCGATAAAGGTTGTCCAGTCAGAACACGTCACAAACTACACTTTGTGTGAGAGAGAAACTGCAGAGAAAATGCTTAACCTCAGTGTGAAGGCCAATATCAACCTCATTCCCAAGCGCCCCAATGACACAAAGTCAGTAGAACAGTTTTGTAGAGACTCCGTGATCACTATTTGGCACTACCATGGTGGGTGCCATGTGGGGAAGGTGGTTAACTCTGAGCATAAGGTTCTTGGTGTTGATAGACTCCGTGTGGTTGATGGCTCAACATTTTCTGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGCAGGTACATGGGACTGAAGATTTTAAGGGACAGGTTGGGAAAATTGGCTGCCGGCAGCTATTCCATTGCATATGAAGCACATTGTGCAAGATCCAAGACAATCAATGCTTCCCATGTCCGTCAGAGTCCCATAGCGAAGGATGCTCAAGCGTTGAGTTTTCAACTTGTGCCCTCATCCCGGTTCTCCGATGAGTTTCCGGTTGCAGGAGGTCATTGA 1917 0.4564 MAFIGAVKFLLQYLVLLCLLNYLPLSQGKQNWNEGYPFIRRASSLGYNGKSGGYDYIIVGGGTAGCPLAATLSQKFKVLLLERGGVPFNNPNVSFLHNFHITLADTSPTSASQYFISTDGVLNARGRVLGGGSSINAGFYTRADPRFIRKVGWDTKLVNESYPWVEKQIVHRPKFSDWQRAVRDGLLAAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLASANPHKLTVLIHATVQNIVFDTTGKRPKATGVIFKDENGKQHEAYLGNDRQSEVIVSSGALGTPQLLLLSGIGPKAELQKLNIPVVLDNQFVGKGMADNPMNTIFVPSKRSVQQSLIETVGITNLGVYIETSSGFGQSKDSIHCHHGILSAEIGQLSTIPPKQRSQEAVKAYVKSKRDIPVEAFRGGFILSKVANPWSTGELKLKNTNVEDNPAVTFNYFSHPYDLRRCVEGIRLAIKVVQSEHVTNYTLCERETAEKMLNLSVKANINLIPKRPNDTKSVEQFCRDSVITIWHYHGGCHVGKVVNSEHKVLGVDRLRVVDGSTFSESPGTNPQATVMMMGRYMGLKILRDRLGKLAAGSYSIAYEAHCARSKTINASHVRQSPIAKDAQALSFQLVPSSRFSDEFPVAGGH 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00227 638 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 583 - -
Gma15g00227 638 Pfam GMC oxidoreductase 54 326 IPR000172 GO:0016614|GO:0050660
Gma15g00227 638 PANTHER OSJNBA0019K04.7 PROTEIN 2 583 - -
Gma15g00227 638 Gene3D - 171 517 - -
Gma15g00227 638 SUPERFAMILY FAD/NAD(P)-binding domain 54 578 IPR036188 -
Gma15g00227 638 SUPERFAMILY FAD-linked reductases, C-terminal domain 322 524 - -
Gma15g00227 638 ProSitePatterns GMC oxidoreductases signature 2. 285 299 IPR000172 GO:0016614|GO:0050660
Gma15g00227 638 Gene3D - 54 567 IPR036188 -
Gma15g00227 638 PIRSF Alcohol_oxidase 39 584 IPR012132 GO:0050660
Gma15g00227 638 Pfam GMC oxidoreductase 422 568 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00227 Gma-Chr15 1990831 2002703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00227 54 578 Miscellaneous Gene Families AT5G51950 51.698 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00227 K15403 - gmx:100818122 1163.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03139 13 45533738 45539916 Gma15g00227 15 1990831 2002703 GST
Gma15g00227 15 1990831 2002703 Gma07g00092 07 755296 762173 PCT
Gma15g00227 15 1990831 2002703 Gma08g01782 08 15857041 15863970 PCT
Gma07g00092 07 755296 762173 Gma15g00227 15 1990831 2002703 PCT
Gma08g01782 08 15857041 15863970 Gma15g00227 15 1990831 2002703 PCT