Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03139 ATGGCGTTCATTGGTGCAGTCAAATTCTTGCTGCAGCACTTACTTCTATTATGCCTCTTCAACTATCTACCTTTTTCTCAAGGTAAGCAGAACTGGAATGAAGGGTACCCGTTTATAAGAAGAGCAAGTTCATTGGGTTATAATGGGAAAAGTGGTGGGTATGATTATATAATAGTGGGGGGTGGAACAGCAGGGTGTCCATTGGCTGCAACACTGTCAAAGAAGTTCAAAGTTCTGGTGCTTGAGAGAGGAGGAGTCCCTTTCAACAACCCTAATGTCTCATTTCTGCACAACTTTCACATTACATTGGCAGACACTTCACCAACTTCGGCTTCTCAGTACTTCATTTCAACAGACGGAGTCCTCAATGCAAGGGGAAGGGTTTTGGGTGGCGCCACTTCCATTAACGCTGGCTTCTACACTAGAGCAGACCCAAGATTTATAAGGAAGGTGGGGTGGGATACAAAGCTAGTGAATGAGTCATATCCTTGGGTTGAGAAGCAGATTGTTCACCGGCCAAAGTTTTCAGATTGGCAGAGAGCAGTTAGGGACGGGCTTCTAGCTGCTGGTGTGTCTCCTTTCAACGGCTTCACCTATGATCACAAGTATGGAACCAAAGTTGGTGGAACCATTTTTGACAGATTTGGCCGTCGCCACACAGCTGCTGAATTGCTTGCTTCTGCCAACCCTCACAAACTTACTGTTTTGATCCATGCCACTGTCCAAAAGATTGTTTTTGATACAAAAGGAAAAAGACCAAAAGCTACAGGGGTTATTTTCAAGGATGAAAATGGGAAGCAGCATGAGGCATATCTAGGAAATGACAGGCAGAGTGAGGTGATTGTGTCCAGTGGGGCACTTGGGACTCCTCAATTGCTATTGCTGAGTGGAATTGGCCCAAAAGCAGAGCTTCAGAAATTGAACATCCCTGTTGTGCTTGATAATCAATTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACAATTTTTGTTCCTTCCAAGAGACCAGTTCAGCAGTCACTCATAGAAACTGTTGGTATTACCAATTTGGGTGTCTACATTGAGACCAGCAGTGGGTTTGGCCAGTCCAAAGACAGCATTCACTGCCACCATGGTATCTTGTCAGCTGAGATTGGGCAGTTGTCCACAATTCCACCAAAGCAAAGATCACGAGAAGCTGTAAAAGCTTATGTGAAGAGCAAGAGAGACATACCAGTTGAAGCATTCAGGGGAGGGTTCATATTGTCAAAAGTTGCGAACCCTTGGTCAACAGGTGAGCTCAAGTTGATAAACACCAACGTAGAGGACAACCCTGCTGTTACCTTCAACTACTTCAGTCACCCTTATGATCTTAAGCGCTGTGTGGAGGGTATCCGCTTGGCAATAAAGGTTGTCCAGACAGAACACGTCACAAACTACACTTTGTGTGAGAGAGAAAATGCAGAGAAAATGCTTAACCTCAGTGTGAAGGCCAATATCAACCTCATTCCCAAGCATCCCAATGACACAAAGTCAGTAGAGCAGTTTTGTAGAGACTCTGTGATCACTATTTGGCACTACCATGGTGGGTGCCATGTGGGGAAGGTTGTTAACTCTGAGCATAAGGTTCTTGGTGTTGATAGACTTCGTGTGGTTGATGGCTCAACATTTTCTGAGTCGCCAGGAACCAACCCTCAAGCCACTGTGATGATGATGGGCAGGTACATGGGACTGAAGATTTTAAGGGACAGGCTGGGGAAATTGGCTGGTATTTAA 1758 0.4528 MAFIGAVKFLLQHLLLLCLFNYLPFSQGKQNWNEGYPFIRRASSLGYNGKSGGYDYIIVGGGTAGCPLAATLSKKFKVLVLERGGVPFNNPNVSFLHNFHITLADTSPTSASQYFISTDGVLNARGRVLGGATSINAGFYTRADPRFIRKVGWDTKLVNESYPWVEKQIVHRPKFSDWQRAVRDGLLAAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLASANPHKLTVLIHATVQKIVFDTKGKRPKATGVIFKDENGKQHEAYLGNDRQSEVIVSSGALGTPQLLLLSGIGPKAELQKLNIPVVLDNQFVGKGMADNPMNTIFVPSKRPVQQSLIETVGITNLGVYIETSSGFGQSKDSIHCHHGILSAEIGQLSTIPPKQRSREAVKAYVKSKRDIPVEAFRGGFILSKVANPWSTGELKLINTNVEDNPAVTFNYFSHPYDLKRCVEGIRLAIKVVQTEHVTNYTLCERENAEKMLNLSVKANINLIPKHPNDTKSVEQFCRDSVITIWHYHGGCHVGKVVNSEHKVLGVDRLRVVDGSTFSESPGTNPQATVMMMGRYMGLKILRDRLGKLAGI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03139 585 Pfam GMC oxidoreductase 54 326 IPR000172 GO:0016614|GO:0050660
Gma13g03139 585 SUPERFAMILY FAD-linked reductases, C-terminal domain 322 524 - -
Gma13g03139 585 Gene3D - 54 567 IPR036188 -
Gma13g03139 585 PIRSF Alcohol_oxidase 40 584 IPR012132 GO:0050660
Gma13g03139 585 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 585 - -
Gma13g03139 585 Pfam GMC oxidoreductase 422 568 IPR007867 GO:0016614
Gma13g03139 585 ProSitePatterns GMC oxidoreductases signature 2. 285 299 IPR000172 GO:0016614|GO:0050660
Gma13g03139 585 SUPERFAMILY FAD/NAD(P)-binding domain 54 577 IPR036188 -
Gma13g03139 585 PANTHER OSJNBA0019K04.7 PROTEIN 2 585 - -
Gma13g03139 585 Gene3D - 171 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03139 Gma-Chr13 45533738 45539916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03139 54 580 Miscellaneous Gene Families AT3G56060 51.412 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03139 K15403 - gmx:100784433 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03139 13 45533738 45539916 Gma15g00227 15 1990831 2002703 GST
Gma13g03139 13 45533738 45539916 Gma07g00092 07 755296 762173 PCT
Gma13g03139 13 45533738 45539916 Gma08g01782 08 15857041 15863970 PCT
Gma07g00092 07 755296 762173 Gma13g03139 13 45533738 45539916 PCT
Gma08g01782 08 15857041 15863970 Gma13g03139 13 45533738 45539916 PCT