Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01782 ATGGCTTCATTTGGTGCAGTCAATTACAAATTCTTCTTGTGCCTACTTCTATGGCTCTGGAACTTTCTACCTCTATCTCAAGGTAATCAGCACTGGCATGAAAATAGATACCCTTTTATCAGAAATGCAAGCTCATTCTCATCACCATCAATTTCAACTACGACAAGCAATAATGCCTATGACTACATAATAGTTGGAGGAGGCACAGCAGGGTGTCCTTTGGCTGCAACCCTCTCTCAGAACTTCAGTGTTTTGGTGCTTGAAAGAGGGGGTGTTCCTTTCACCAACCCCAATGTTTCATTTCTGGAGAACTTCCACATTACATTGGCCGACATTTCACCAACTTCAGCTTCTCAGTACTTCATTTCAACTGATGGAGTCTACAATTCAAGGGCAAGGGTCTTGGGAGGTGGAAGTTCTATCAATGCTGGCTTCTACACTAGAGCAAACCCAAGGTTTATAAAGAAGGTGGGGTGGGATGCCAAGCTAGTAAATGAATCATATCCATGGGTTGAGAAGCAAATTGTCCACCGTCCAAAGTTTTCACCTTATCAGAGAGCATTTAGAGACAGTCTTCTAGACTCTGGTGTGTCACCCTTTAATGGCTTCACCTATGATCATCTCTATGGAACAAAGGTTGGTGGAACCATTTTCGACAGATTTGGCCGCCGTCACACGGCTGCTGAACTGCTTGCTTCAGGGAACCATGACAAACTTACTGTTTTGGTCTGTGCCACTGTCCAAAAGATTGTGTTTGATAGAAAAGGAAAGAGACCAAAAGCTGTGGGGGTTATTTTCCAAGATGAACATGGGAAACAGCATGAGGCTATTCTGTCAAATGATAAGCACAGTGAAGTGATAATGTCTAGTGGGGCAATTGGGACTCCTCAGTTGCTAATGCTTAGTGGAATTGGGCCAAAAGCAGAACTCCAGAAGTTGAGCATCCCAGTGGTCCTTGACAACCACTTTGTTGGGAAAGGAATGGTAGATAATCCCATGAACACAATGTTTGTTCCTTCTAATAGACCAGTTAATCAGTCACTCATAGAAACTGTTGGTATCACCAAAATGGGTGTCTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCCAATGATAGCATTCACTGTCACCATGGTATCATGTCAGCTGAGATTGGGCAGCTGTCTACAATTCCTCCTAAGGAAAGATCACCAGAAGCTGTTCAAGAATTTATCAAGAACAAGAAAGACATACCGGTTGAATTATTCAAGGGAGGTTTTATTTTGTCAAAAGTTGCCAATCCTTGGTCAGTAGGTGAACTCAGGCTGAACAACACCAATGTGAACGACAACCCTGTCGTTACCTTCAACTACTTCAGTCATCCATATGATCTTCATCGCTGTGTCAAGGGGATTCGCTTGGCCATTAAGGTTGTCCAGTCAAAACACTTCACAAACTACACTTTGTGTGACAAGAAAACCACAGAGGAACTGCTGAACCTCACTGTCAAGGCTAATGTCAACTTCATACCCAAGCATCCCAATGACACAGCGTCGATAGCACAGTTCTGCAAAGACACCGTGATCACAATTTGGCACTACCATGGAGGGTGCCATGTGGGGAAGGTAGTCAGCCCTGATTACAAGGTTCTTGGCGTTGACAGACTTCGTGTGGTAGACGGCTCAACATTTGACGAATCACCAGGAACAAATCCTCAAGCAACTGTCATGATGATGGGCAGGTACATGGGGCTGAAGATTTTGAGACATAGGTTGGGGAAATTGGCTGGTATATAA 1776 0.4398 MASFGAVNYKFFLCLLLWLWNFLPLSQGNQHWHENRYPFIRNASSFSSPSISTTTSNNAYDYIIVGGGTAGCPLAATLSQNFSVLVLERGGVPFTNPNVSFLENFHITLADISPTSASQYFISTDGVYNSRARVLGGGSSINAGFYTRANPRFIKKVGWDAKLVNESYPWVEKQIVHRPKFSPYQRAFRDSLLDSGVSPFNGFTYDHLYGTKVGGTIFDRFGRRHTAAELLASGNHDKLTVLVCATVQKIVFDRKGKRPKAVGVIFQDEHGKQHEAILSNDKHSEVIMSSGAIGTPQLLMLSGIGPKAELQKLSIPVVLDNHFVGKGMVDNPMNTMFVPSNRPVNQSLIETVGITKMGVYIEASSGFSQSNDSIHCHHGIMSAEIGQLSTIPPKERSPEAVQEFIKNKKDIPVELFKGGFILSKVANPWSVGELRLNNTNVNDNPVVTFNYFSHPYDLHRCVKGIRLAIKVVQSKHFTNYTLCDKKTTEELLNLTVKANVNFIPKHPNDTASIAQFCKDTVITIWHYHGGCHVGKVVSPDYKVLGVDRLRVVDGSTFDESPGTNPQATVMMMGRYMGLKILRHRLGKLAGI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01782 591 PANTHER OSJNBA0019K04.7 PROTEIN 2 591 - -
Gma08g01782 591 SUPERFAMILY FAD/NAD(P)-binding domain 52 582 IPR036188 -
Gma08g01782 591 PIRSF Alcohol_oxidase 40 589 IPR012132 GO:0050660
Gma08g01782 591 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 530 - -
Gma08g01782 591 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 591 - -
Gma08g01782 591 ProSitePatterns GMC oxidoreductases signature 2. 291 305 IPR000172 GO:0016614|GO:0050660
Gma08g01782 591 Gene3D - 177 523 - -
Gma08g01782 591 Pfam GMC oxidoreductase 60 332 IPR000172 GO:0016614|GO:0050660
Gma08g01782 591 Gene3D - 60 573 IPR036188 -
Gma08g01782 591 Pfam GMC oxidoreductase 428 574 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01782 Gma-Chr8 15857041 15863970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01782 60 584 Miscellaneous Gene Families AT5G51950 53.484 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01782 K15403 - gmx:100779461 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00092 07 755296 762173 Gma08g01782 08 15857041 15863970 GST
Gma13g03139 13 45533738 45539916 Gma08g01782 08 15857041 15863970 PCT
Gma15g00227 15 1990831 2002703 Gma08g01782 08 15857041 15863970 PCT
Gma08g01782 08 15857041 15863970 Gma13g03139 13 45533738 45539916 PCT
Gma08g01782 08 15857041 15863970 Gma15g00227 15 1990831 2002703 PCT