Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00203 ATGACGACGAGGCTCCTTAGAACGATCTTCATCGCCCACAAGCTCCACCTCCGCAACCCCAAATGTATTTTCCCACCTCTCCTTTCCCGCCACTCCTCCACGGCCACAAATTCCTCCGAGGCCCGCGAACCAGCAAAGGAAACCACCACCACCACCACCAGTTGGAGCATGTACGGAAACGTCTACGACCGCCCAATTGCGCAGCGCGAGCTAAACGACCACAGCGACGGAGACGAAAACCCTAGCAGCGGGAGAGCAGCAAAGAGTGTAGCAGTAGTGACGAAGATAAAGGGAAAGGGGAAGGTGAAAACTCAGTGGGTGTGCTGCAGTTGCGGCCACTCAACAGGAAAATGGTGGGGGCAATGCCCCGAATGCGAAATGGTTGGCACAATGAACGAGTTTCATGAGAGCAAATTGACTGACAGCAAGTCCAGAGGTGGGTTAGAAGTTTCCGAGGATGCAGTGGGCTTGTGGCTCCCGCAACGACCCGAAGACTTGCGCCCCGTCAAATTGGAAGAGGTGAACCGTGGATTCAATTACCAGCAATGGAGAATACCTTTGTCTGGTTCTTTTGGAAATGAAGTTTCTACAGTGCTTGGTGGAGGTCTTGTACCAGGTTCTTTAACTTTAGTTGGTGGTGATCCTGGTATTGGGAAAAGTACACTGCTGTTGCAGATTGCAGCAATGATAGCAAACGAATGCAGTGACTATGAAGGACCTCCAGTTGTATATGTCTCTGGTGAAGAGAGCCTTCAGCAAATTGGTATTAGAGCAGATCGCCTTGGGATTAAGTCCAATATTTATTTATATTCAAGTACTGATATAGAGGACATATTGACGAAGACTCAtggtctatcccctcgtgctctggtggttgattcgatacaaactgtttacctgaaaactatAATAGGAAGTGCTGGAGGGATTATGCAGGTGAAGGAATGTACTGCAGCTTTGATGCGATTTGCAAAAACAACTAACATCTCAGTTTTTTTGATTGGACATGTGACTAAGTCTGGAGACATAGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTATATATGGAAGGCGAGAAGTACTCTCCATATCGAATGCTTCGAGCTGTGAAAAATCGGTTTGGATCCACTGATGAGCTTGCAGTTCTTGAGATGTCGCAGTCAGGACTCCAGGTTGTTTCAAATGCCAGTGAAATGTTTCTCACTCAACAACACTCCGATTCAAATGTTTTAGCTGGGCTTGCTATTGCTGTAATAATGGATGGTTCAAGAACTTTTTTAATTGAAATTCAGGCACTTTGCCTTACACATTGCCCAGTTTCGAGTTCACTATCTAATGGGATCAATGCCAACAAAGCTAATATTATTAAATGTGTACTTATAAAGCAAACAGGCCTCCATCTTCAAGATAATGCCATGTTTTTGAATGTTGTTAGTGGAATGACAGTGACAGAGACTGCTGGAGATCTTGCAATAGCAGCTGCAATTTGCAGCAGTTTCTTGGAGTTCCCAATTCCAGAGGGGACTGCATTCATTGGTGAAATTGGCCTTGGTGGAGAGCTTCGCATGGTTCCTAGAATTGAAAAAAGGGTTAACACATTGGTGAAGTTGGGTTACAGAATGTGTGTAGTACCAAAGCAGGCTGAAAAACTTTTAGAAACCGAAGGTCTAGGAAAGATGAAAGTTGTAGGTTGCAAGGATCTGAAAGAGGTTATTAACGCTGTATTCAGTAGAAATAATTAA 1752 0.4344 MTTRLLRTIFIAHKLHLRNPKCIFPPLLSRHSSTATNSSEAREPAKETTTTTTSWSMYGNVYDRPIAQRELNDHSDGDENPSSGRAAKSVAVVTKIKGKGKVKTQWVCCSCGHSTGKWWGQCPECEMVGTMNEFHESKLTDSKSRGGLEVSEDAVGLWLPQRPEDLRPVKLEEVNRGFNYQQWRIPLSGSFGNEVSTVLGGGLVPGSLTLVGGDPGIGKSTLLLQIAAMIANECSDYEGPPVVYVSGEESLQQIGIRADRLGIKSNIYLYSSTDIEDILTKTHGLSPRALVVDSIQTVYLKTIIGSAGGIMQVKECTAALMRFAKTTNISVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSPYRMLRAVKNRFGSTDELAVLEMSQSGLQVVSNASEMFLTQQHSDSNVLAGLAIAVIMDGSRTFLIEIQALCLTHCPVSSSLSNGINANKANIIKCVLIKQTGLHLQDNAMFLNVVSGMTVTETAGDLAIAAAICSSFLEFPIPEGTAFIGEIGLGGELRMVPRIEKRVNTLVKLGYRMCVVPKQAEKLLETEGLGKMKVVGCKDLKEVINAVFSRNN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00203 583 ProSiteProfiles RecA family profile 1. 184 337 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Gma15g00203 583 SMART AAA_5 205 363 IPR003593 -
Gma15g00203 583 PANTHER DNA REPAIR-LIKE PROTEINRADA 4 583 - -
Gma15g00203 583 Pfam Subunit ChlI of Mg-chelatase 464 550 - -
Gma15g00203 583 TIGRFAM sms: DNA repair protein RadA 101 573 IPR004504 GO:0003684|GO:0005524|GO:0006281
Gma15g00203 583 Gene3D - 194 396 IPR027417 -
Gma15g00203 583 SUPERFAMILY Ribosomal protein S5 domain 2-like 374 580 IPR020568 -
Gma15g00203 583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 388 IPR027417 -
Gma15g00203 583 PRINTS DNA repair protein radA signature 108 132 - -
Gma15g00203 583 PRINTS DNA repair protein radA signature 197 225 - -
Gma15g00203 583 PRINTS DNA repair protein radA signature 293 317 - -
Gma15g00203 583 PRINTS DNA repair protein radA signature 332 360 - -
Gma15g00203 583 PRINTS DNA repair protein radA signature 367 393 - -
Gma15g00203 583 PRINTS DNA repair protein radA signature 443 466 - -
Gma15g00203 583 Pfam AAA domain 197 341 - -
Gma15g00203 583 Gene3D - 407 583 IPR014721 -
Gma15g00203 583 MobiDBLite consensus disorder prediction 33 54 - -
Gma15g00203 583 PANTHER DNA REPAIR PROTEIN RADA 4 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00203 Gma-Chr15 1647107 1656559 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00203 K04485 - gmx:100791181 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00203 15 1647107 1656559 Gma15g00203 15 1647107 1656559 ECH
Gma13g03163 13 45760070 45764562 Gma15g00203 15 1647107 1656559 GST
Gma15g00203 15 1647107 1656559 Gma08g01832 08 16424653 16433854 PCT
Gma08g01832 08 16424653 16433854 Gma15g00203 15 1647107 1656559 PCT