Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01832 ATGCTTTCCTTCTCTGTTTCTGGTTTCCCTCCATTCCCACTTCGCAGGGCATATCCAAGAAGAGTAAGTGCAAGCTTTGACATTGACACCCCACAAGACCCCAATTCAGTCAACCCTAATGGCTCGAATGCTAAATTTGAAGAAGAAGAAGAAGAATTTCGAAAGGGAAAGGAGAGAGGGAGAGTGATAGGTGGTGGTGGGGTTTTCATTGGAAGGAAGAAGAAGGCGGGGAAGGAGAAAGTTCAATGGGTTTGCTGCAATTGTGGGTACAGTGCAGGGCAATGGTGGGGCGTGTGTCGATCATGCAGTGTATCTGGCACTATGAAAGAAGCCAAATTCAGTGATGCTGATACTGTGGTTAGTGGGTTTTCAGTTTTGGAGGATGGTGTTGTGGGGTCTTGGCTACCGCAACAGGAAGGTGAAATGCGCCCCTTGAGATTGACAGAGGTAAACAAGGGACTTGATCATCACCATTGGAGAATTCCTCTGTCTGGTCCATTTGGAGATGAAGTTTCCAGAGTGCTTGGTGGTGGTCTTGTACCAGGCTCATTGACTTTAATTGGTGGTGATCCTGGTGTTGGGAAGAGTACTTTGTTGTTGCAGATAGCTGCAATTATTGCAAAAGGTGACAGTGATGGTGAAGCATGTCCAGTTGTATATGTCTCTGGTGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGCCTTAGGATTGAATCAGATATTTATTTATATTCAAGTAATGATGTTGAGGACATACTGAAGAAAGTACAGTATCTCTCCCCTGGGGCTCTTATTGTTGATTCGATACAAACTGTTTATTTAAAAGGAATAATGGGAAGTCCTGGAGGGATTATGCAGGTGAAAGAATGTACTTCAGCTTTACTGCGATTTGCGAAGAAGACAAACATCCCAGTTCTTTTGATTGGACATGTGACAAAATCTGGAGACATTGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTGTATATGGAAGGTGAGAAGTACTCTTCTCATCGTATGCTTCGAGCTGTGAAAAATCGATTTGGATCTGCTGATGAGCTTGGGGTTTTTGAGATGTCACATTCAGGACTTCAGGCTGTTTCAAATGCCAGTGAAATGTTTCTCAGTGAACAGCTCCTGGATTCAGAAATATTAGCTGGACTAGCTGTTGCTGTAATCATGGATGGGTCCCGGACATTCCTTATTGAAATTCAGGCACTTTGTCTTTCTGGTTCAACAGGTTCAAGGCAAGTTAATGGGATCCAACAAAAAAGAGCTGATATGATCATATCTGTTCTTATAAAGCAAGCAGGTCTTCGTCTCCAAGAACATGCTGTATTTTTGAATGTTGTTAGTGGATTGGCACTGACTGAGACTGCAGGAGATCTAGCTATAGCAGCAGCAATTTGCAGCAGTTGCTTGGAAATCCCTATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCATGGTTCCTAGAATGGAGAAAAGGGTATATACCGTTGCGAAATTGGGTTACAGAATGTGTATAGTACCCAAGGTGGCTGAAAAAGCTTTGGGAACCGAAGGTTTAGAAAAGATGGAAGTTGTTGGTTGCAGGAATCTGAAAGAGGTTATTAACACTGTATTCCTTAATATAATGAGGAGGTAG 1683 0.4302 MLSFSVSGFPPFPLRRAYPRRVSASFDIDTPQDPNSVNPNGSNAKFEEEEEEFRKGKERGRVIGGGGVFIGRKKKAGKEKVQWVCCNCGYSAGQWWGVCRSCSVSGTMKEAKFSDADTVVSGFSVLEDGVVGSWLPQQEGEMRPLRLTEVNKGLDHHHWRIPLSGPFGDEVSRVLGGGLVPGSLTLIGGDPGVGKSTLLLQIAAIIAKGDSDGEACPVVYVSGEESVEQIGNRADRLRIESDIYLYSSNDVEDILKKVQYLSPGALIVDSIQTVYLKGIMGSPGGIMQVKECTSALLRFAKKTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRMLRAVKNRFGSADELGVFEMSHSGLQAVSNASEMFLSEQLLDSEILAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQVNGIQQKRADMIISVLIKQAGLRLQEHAVFLNVVSGLALTETAGDLAIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVAEKALGTEGLEKMEVVGCRNLKEVINTVFLNIMRR 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01832 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 364 IPR027417 -
Gma08g01832 560 Gene3D - 169 370 IPR027417 -
Gma08g01832 560 PANTHER DNA REPAIR PROTEIN RADA 45 554 - -
Gma08g01832 560 SUPERFAMILY Ribosomal protein S5 domain 2-like 350 553 IPR020568 -
Gma08g01832 560 ProSiteProfiles RecA family profile 1. 160 313 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Gma08g01832 560 PANTHER DNA REPAIR-LIKE PROTEINRADA 45 554 - -
Gma08g01832 560 SMART AAA_5 181 339 IPR003593 -
Gma08g01832 560 TIGRFAM sms: DNA repair protein RadA 78 546 IPR004504 GO:0003684|GO:0005524|GO:0006281
Gma08g01832 560 MobiDBLite consensus disorder prediction 28 43 - -
Gma08g01832 560 Pfam AAA domain 174 317 - -
Gma08g01832 560 Pfam Subunit ChlI of Mg-chelatase 434 524 - -
Gma08g01832 560 PRINTS DNA repair protein radA signature 85 109 - -
Gma08g01832 560 PRINTS DNA repair protein radA signature 173 201 - -
Gma08g01832 560 PRINTS DNA repair protein radA signature 269 293 - -
Gma08g01832 560 PRINTS DNA repair protein radA signature 308 336 - -
Gma08g01832 560 PRINTS DNA repair protein radA signature 343 369 - -
Gma08g01832 560 PRINTS DNA repair protein radA signature 418 441 - -
Gma08g01832 560 Gene3D - 389 559 IPR014721 -
Gma08g01832 560 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01832 Gma-Chr8 16424653 16433854 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01832 K04485 - gmx:100794165 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01832 08 16424653 16433854 Gma08g01832 08 16424653 16433854 ECH
Gma13g03163 13 45760070 45764562 Gma08g01832 08 16424653 16433854 PCT
Gma15g00203 15 1647107 1656559 Gma08g01832 08 16424653 16433854 PCT
Gma08g01832 08 16424653 16433854 Gma13g03163 13 45760070 45764562 PCT
Gma08g01832 08 16424653 16433854 Gma15g00203 15 1647107 1656559 PCT