Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03163 ATGAAAATCAAATCATACGAGACCTACTTGTACCTAGCTGAACGATCTTCATCGCCCAGAAGCTCCACCTCCGCAACCCCAAATGCATTTTCCCACTACTCCTCCGAAGCCAACAAAGGAAACCAGCAGCAGTTGGAGCATGTACGGAAACGTCTACGACCGCCCAGTTGCGCAGCAGTGACGAAGATAAAGGGAAAGGGGAAGGTGAAAACTCAGTGGGTGTGCTGCAATTGCGGGCACTCGACAGGGAAATGGTGGGGGCAGTGCCCCGAGTGCCAAATCGTTGGCACAATGAACGAGTTTCGTGAGAGCAAACTCACTGGCACCAAGTCCAGTGGTGGGTTAGCAGTTTCCGAGGATCCAGTGGGCTCATGGCTCCCACAACGACCCCAAGAGTTGCGCCCCCTCAAATTGGAAGAGATCAACCGTCGATTCAATTACCAGCAATGGAGAATACCTTTGTCGGGTTCTTTTGGAAATGAAGTTTCTACTGTGCTTGGTGGAGGTCTCGTACCAGGTTCTTTAACTTTAGTTGGTGGTGATCCTGGTATTGGGAAAAGTACACTGCTGTTGCAGATTGCAGCAATGATAGCAAAAGAATGCAGTGATGATGAAGAACCTCCAGTTGTATATGTCTCTGGTGAAGAGGTTCCTAGAATTGATAAAAGGGTTAACACATTGGCGAAGTTGGGTTACAGAATGTGTGTAGTACCAAAGCAAGCTGAAAAACTTTTAGAAACCGAAGGTCTGGGAAAGATGAAAGTTTTAGGTTGCGAGGTTCTGAAAGAGGTTATTAATGCTGTATTCAGTAGAGATAATTAA 822 0.4696 MKIKSYETYLYLAERSSSPRSSTSATPNAFSHYSSEANKGNQQQLEHVRKRLRPPSCAAVTKIKGKGKVKTQWVCCNCGHSTGKWWGQCPECQIVGTMNEFRESKLTGTKSSGGLAVSEDPVGSWLPQRPQELRPLKLEEINRRFNYQQWRIPLSGSFGNEVSTVLGGGLVPGSLTLVGGDPGIGKSTLLLQIAAMIAKECSDDEEPPVVYVSGEEVPRIDKRVNTLAKLGYRMCVVPKQAEKLLETEGLGKMKVLGCEVLKEVINAVFSRDN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03163 273 PANTHER DNA REPAIR-LIKE PROTEINRADA 30 216 - -
Gma13g03163 273 MobiDBLite consensus disorder prediction 15 49 - -
Gma13g03163 273 Pfam AAA domain 161 227 - -
Gma13g03163 273 PRINTS DNA repair protein radA signature 164 192 - -
Gma13g03163 273 PRINTS DNA repair protein radA signature 75 99 - -
Gma13g03163 273 PANTHER DNA REPAIR PROTEIN RADA 217 273 - -
Gma13g03163 273 PANTHER DNA REPAIR-LIKE PROTEINRADA 217 273 - -
Gma13g03163 273 Pfam Rubredoxin metal binding domain 73 100 IPR041166 -
Gma13g03163 273 PANTHER DNA REPAIR PROTEIN RADA 30 216 - -
Gma13g03163 273 MobiDBLite consensus disorder prediction 15 42 - -
Gma13g03163 273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 222 IPR027417 -
Gma13g03163 273 Gene3D - 161 265 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03163 Gma-Chr13 45760070 45764562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03163 K04485 - gmx:100780135 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03163 13 45760070 45764562 Gma13g03163 13 45760070 45764562 ECH
Gma13g03163 13 45760070 45764562 Gma15g00203 15 1647107 1656559 GST
Gma13g03163 13 45760070 45764562 Gma08g01832 08 16424653 16433854 PCT
Gma08g01832 08 16424653 16433854 Gma13g03163 13 45760070 45764562 PCT