Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00064 ATGTCGCGGACAAAGCCTTCTCCTTACGCTTACGTTCGCCGCCGCCCGGAAAGGATTCAACCTGCTGTCCTGCCAATGGAGTTTAATATCCCTGATTCAGAAACACAACAAAATAGCAGGAGGAGAAAGAAATCGACTGTCTGGGAACACTTCACTGTTAAAAAGGATGGACCTGGATGTGCCAGGGCTTACTGTAAAAGATGCCAAAAATCATTTGCGTATCTAAAAGATTCAAAACAATCTGGCACCAGTCATCTCAAGAGACACATTGCTTTGGGAATCTGTCAGAAAAATCTAGGAATCCTGTGTTCCAAAACTGATGCCAATCCACCAAAGAAACAAGCAAGAGCGAAACCTTGTCTTGCTGCTATCTCATTTGATCAGGAGCGTTGCAACAGTAAGATTGCTAAAATGATTATTTTACATGACTATCCACTTCATATTGTGGAACACCAAGGTTTCATTGATTTTGTTCGAGCACTTCAACCCCAGTTCAATCCACTGAGCTTTAATGCTATTCAAGGGGATTGTGTCACTATGTACCTCAGAGAGAAGCAAAACCTATTGAATCTTATTGATGGGATTCCTGGACGAGTTAATCTCACCTTGGACTTATGGACTTCAAACCAAACATCGGCATATGTTTTTCTTCGAGGGCACTTCATTGACGGTGATTGGAACCTACATCATCCTATTCTTAACGTATTCATGGTACCATTTCCTGATTCTGATGGTTCCTTGAATCAAACTATAGTGAACTGCCTAAGTGATTGGCATTTGAAAGGTAGGCTATTTACCCTTGCACTTGATAAATTCTTCTCCAACGAGACTTTGGGAAAGCTGAGAAGTCTCCTCTCTGTTAATAACCCTGTTATCCTCAATGGTCAATTATTAAGCCAGAACTGTTATGCTCGTGTGCTTAGTCGCCTTGCATTAGATGCGTTATCAGCTATGAGAGAATCTATTGATAAAGTTCGGGAGAGTGTGAAGTATGTGAAATCTTCTAAATCTATTGAAGGGAATTTTTTGAATCTGAGGCAACAACTTCAAGTCCCTAGTACGATGGACCTTTTAATTGATGACCAAAATAAATGGGATACAATTTACCACATGCTAGTTGCTGCTTGTGAATTAAAGGAAGTTTTTGCTTGCTTTGATGCCTCTAATCCTGATTTCAGAACGACTCTAACATTGGATGACTGGAAGCAGGTGGAAAAACTCTGTGCATATCTGAAGTACTTGTATGATGCAGCTAACATTTTAACTGTTCAACCATACCCAACTGCAAATGTATTTTTCCTTGAAGTGTCCAAACTTCAGGTGGAGTTGACTTGTGCTGCCTTAAGCCAGGATCCTTTCTGTAGTCATTTGATTACGCCTTTGCAAgagaagtttgaccaatattggagagaaagctgcttcgtcttggctgttgctgtagtcatggatccaagatataaaatgaaacttgtggaatccacttttgctaagatatttggtgagaatgctgACCAATGGATAAGAATTGTTGAGGATGGTCTTCATGAGCTGTTCCTTGAATATAATATCATACAAGTGCTTCCTTTTACAGCAACAAATGATGATGAAGGGAATGAAGCTATGATAAAGACTGAGCCATTTCAAGAATTTGATGGATCTCTTTTTGCTGCTGATGATGGACTTTCTGATTTTGAGTTCTATATATCTGATTTTACATGTAACCAGCAATTTAAGACAGAATTGGATGAATATCTTGAAGAGCCTCTAGAACCCAGAGTACAAGAATTTGATATTCTGAGCTGGTGGAGAATAAACGGATTGAAGTACCCAACATTGTCTAGACTAGCATCTGATATTTTGTGTATGCCAATATCCACCCTTTCTGCAGATGCTGTTTTTGATACAGAAATTAGAAAAATGGATAGCTACAGGAGTTCATTAGACTCCTTGACTCTTGAGGCCCTTATTTGTACCAAGGACTGGTTACAGTATAAATCATTACCCATCAATGTTCCAAATGCACTTGTCAAAATTGAATGTTAG 2043 0.3696 MSRTKPSPYAYVRRRPERIQPAVLPMEFNIPDSETQQNSRRRKKSTVWEHFTVKKDGPGCARAYCKRCQKSFAYLKDSKQSGTSHLKRHIALGICQKNLGILCSKTDANPPKKQARAKPCLAAISFDQERCNSKIAKMIILHDYPLHIVEHQGFIDFVRALQPQFNPLSFNAIQGDCVTMYLREKQNLLNLIDGIPGRVNLTLDLWTSNQTSAYVFLRGHFIDGDWNLHHPILNVFMVPFPDSDGSLNQTIVNCLSDWHLKGRLFTLALDKFFSNETLGKLRSLLSVNNPVILNGQLLSQNCYARVLSRLALDALSAMRESIDKVRESVKYVKSSKSIEGNFLNLRQQLQVPSTMDLLIDDQNKWDTIYHMLVAACELKEVFACFDASNPDFRTTLTLDDWKQVEKLCAYLKYLYDAANILTVQPYPTANVFFLEVSKLQVELTCAALSQDPFCSHLITPLQEKFDQYWRESCFVLAVAVVMDPRYKMKLVESTFAKIFGENADQWIRIVEDGLHELFLEYNIIQVLPFTATNDDEGNEAMIKTEPFQEFDGSLFAADDGLSDFEFYISDFTCNQQFKTELDEYLEEPLEPRVQEFDILSWWRINGLKYPTLSRLASDILCMPISTLSADAVFDTEIRKMDSYRSSLDSLTLEALICTKDWLQYKSLPINVPNALVKIEC 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00064 680 SUPERFAMILY beta-beta-alpha zinc fingers 45 91 IPR036236 -
Gma15g00064 680 ProSiteProfiles Zinc finger BED-type profile. 42 102 IPR003656 GO:0003677
Gma15g00064 680 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 29 669 - -
Gma15g00064 680 SUPERFAMILY Ribonuclease H-like 192 664 IPR012337 -
Gma15g00064 680 SMART bed5 42 98 - -
Gma15g00064 680 Pfam Domain of unknown function (DUF4413) 424 521 IPR025525 GO:0003677
Gma15g00064 680 PANTHER BED FINGER-RELATED 29 669 IPR045259 -
Gma15g00064 680 Pfam hAT family C-terminal dimerisation region 580 662 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00064 Gma-Chr15 560346 565183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00064 - - gmx:106796308 1329.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00064 15 560346 565183 Gma15g00064 15 560346 565183 ECH
Gma13g03286 13 46804331 46808623 Gma15g00064 15 560346 565183 GST
Gma15g00064 15 560346 565183 Gma07g00271 07 2378639 2385214 PCT
Gma07g00271 07 2378639 2385214 Gma15g00064 15 560346 565183 PCT