Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00271 ATGTTCATAAACTGGCAGTGGCACGTGCTTTCACAACTCCCCCTTTTCTCAAGGGTTACTCGTGCTATCATGGAGTTTGTTGCTCGTGCTACCCCTGATAATAATGATGAGATATCTGATTCAGGAACACAACCCAATAAGCAGATGAGAAAGAAGTCTATGGTGTGGGACTACTTCACAGTGGAAACTGTTGGAGCTGGATGTACCAGGGCCTACTGTAAACAGTGCAAAAAATCATTTTCTTATATAACTGATTCAAAATTATCTGGCACAAGCCATCTGAAAAGACACATTTCTTTGGGAATCTGTCGAGTGCTTTGGGAGAAAAACCAACAAAGATCATATCCCAAAACTGGTGGCTCTCTAGATACTGCCAATCCACCCAAGAAACAGCCAAGAGCAACACCTGGGTTTGCTGGTAATGGCATCTCATTTGATCAGGAGCGTTGCAACCATGATGTCGCTAAAATGATAATTTTACATGATTATCCACTTCATATTGTGAAACAACAGGGTTTCATTGATTTTGTGCGGATTCTTCAACCCCAGTTCAATCCATTATGTCTAAATTCTGTTGAAGGGGATTGTGTCGCTATCTACCTCAGAAAAAAGCAAAATCTGTTGAATGTTATTAATGGGATTCCTGGCCAAGTAAACCTGACATTGgatttgtggacttccaaccaggcaatgggctatgtttttgttcgaggacacttcattgatagtgattggaaattacatcgtcctattctcaatGTTGTTACAGTACCATTTCCTGTTTCTGATGACTCTTTAAATCAAACTTTAGTAACCTGCCTATCTGATTGGCATTTGGAGGGTCGGCTGTTTACCCTTGCACTTGATAAATCCTTTTCCAGTGAAGCTGTGATGGGAAATCTGAGAGGCCTTCTCTTTGTTAAGAACCCTGCAATCCTCAATGGTCAGTTGTTAAACCAGAATTGTTATGCTCGTGTTCTTAGTCGTCTTGCAGCAGATGCACTATGGACAATGAGAGAAACTATTTGCAAAGTTCGTGAAAGTGTAAAGCATGTGAAATCTTCTGAATCCCATAAAAGGAAGTTTATCGAGCTGAAGCAACATCTACAAGTACCTAGTATGATGGACCTTTCAATTGATGACCAGTGTAAATGGGACACAACATATCATATGCTTGTAGCTGCCTGTGAATTAAAGGAAGTCTTCACTTGCCTTGATACCATTGATCCTGATTACAGAATGACTCTAACAATGGGTGACTGGAAGCAGGTTGACACCCTGTGCACATATTTGAAGTATTTGTATGATGCAGCTATTATTTTGACTGTGCAACCATGCCCAACTTCAAACTTGTTTTTTGCTGAAGTGTCAAAAGTTCAGGTGGAGTTGACACATGCGGCCTTCAGCCAGGATCCTTTCCTTAGCAGTTTGTTTTTGCCTTTGCACAAGAACTTTGACCAATATTGGAGAGAAAGCTGCCTCATCTTGGCAATTGCTGTAGCTATGGACCCAAGGCATAAAATGAAACTTGTCGAATTCACCTTTGCTAAGATATTTGGTGAGAATGCTGAGGAATGGATAAAAATAGTTGAGGATGGTCTTCGTGAACTTTTTATTGAATATAGCATGCAAATGTTCCTTACAACAACAAATGGCGATGAAGGGGATGACATTATGATAAAAAAAACATTTCTAGAAGGGTCAATTGACTGCTCACTTTTTGTTGACGGGGATGAATTTTCGGATTATGAATTCTACATATCTGATTTTACGGGTATAGGTTTCTCCATGTAG 1794 0.3802 MFINWQWHVLSQLPLFSRVTRAIMEFVARATPDNNDEISDSGTQPNKQMRKKSMVWDYFTVETVGAGCTRAYCKQCKKSFSYITDSKLSGTSHLKRHISLGICRVLWEKNQQRSYPKTGGSLDTANPPKKQPRATPGFAGNGISFDQERCNHDVAKMIILHDYPLHIVKQQGFIDFVRILQPQFNPLCLNSVEGDCVAIYLRKKQNLLNVINGIPGQVNLTLDLWTSNQAMGYVFVRGHFIDSDWKLHRPILNVVTVPFPVSDDSLNQTLVTCLSDWHLEGRLFTLALDKSFSSEAVMGNLRGLLFVKNPAILNGQLLNQNCYARVLSRLAADALWTMRETICKVRESVKHVKSSESHKRKFIELKQHLQVPSMMDLSIDDQCKWDTTYHMLVAACELKEVFTCLDTIDPDYRMTLTMGDWKQVDTLCTYLKYLYDAAIILTVQPCPTSNLFFAEVSKVQVELTHAAFSQDPFLSSLFLPLHKNFDQYWRESCLILAIAVAMDPRHKMKLVEFTFAKIFGENAEEWIKIVEDGLRELFIEYSMQMFLTTTNGDEGDDIMIKKTFLEGSIDCSLFVDGDEFSDYEFYISDFTGIGFSM 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00271 597 Pfam Domain of unknown function (DUF4413) 445 541 IPR025525 GO:0003677
Gma07g00271 597 ProSiteProfiles Zinc finger BED-type profile. 50 110 IPR003656 GO:0003677
Gma07g00271 597 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 38 591 - -
Gma07g00271 597 SMART bed5 50 106 - -
Gma07g00271 597 SUPERFAMILY Ribonuclease H-like 215 546 IPR012337 -
Gma07g00271 597 MobiDBLite consensus disorder prediction 114 138 - -
Gma07g00271 597 PANTHER BED FINGER-RELATED 38 591 IPR045259 -
Gma07g00271 597 SUPERFAMILY beta-beta-alpha zinc fingers 53 107 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00271 Gma-Chr7 2378639 2385214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00271 - - gmx:106799409 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00271 07 2378639 2385214 Gma07g00271 07 2378639 2385214 ECH
Gma13g03286 13 46804331 46808623 Gma07g00271 07 2378639 2385214 PCT
Gma15g00064 15 560346 565183 Gma07g00271 07 2378639 2385214 PCT
Gma07g00271 07 2378639 2385214 Gma13g03286 13 46804331 46808623 PCT
Gma07g00271 07 2378639 2385214 Gma15g00064 15 560346 565183 PCT