Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03286 ATGCCACATATAGGACTTGGTGTCCTGGTTGTAATATCCAAAGCCAAAGCCTCGTGTACTTTGATGGCGCTTCCCTTCCATTCCAACACGTTCGTTCGTTCGTTCACTGCCTTCTCCTCCTTAGGCTACGTTCGCCGCCGCAGCCCGGAAAGGATTCAACCTTCTGTCATGTCAATGGAGTATGATATACCTGATTCTGAAATACAACAAAATAGCAGGAGAAGAAAGAAATCTACTGTCTGGGAACACTTCACTGTGAAAATGGATGGACCTGGATGTGCCAGGGCTTACTGTAAAAGATGCCAAAAATCATTTGCTTATCTAAAAGATTCAAAACAATCTGGCACCAGTCATCTCAAGAGACACATTACTTTGGGAATCTGTCAGAAAAATCAACGAATACCATGTTCCAAAACCGATGCCAATCCACCAAAGAAACGAGCAAGAGCAAAACCTTGTTTTGCTGCTATCTCATTTGATCAGGAGCGTTGCAACAGTAAGATTGCTAAAATGATTATTTTACATGACTATCCACTTCATATTGTGGAACACCAAGGTTTCATTGATTTTGTTCGAGCACTACAACCCCAGTTCAATCCACTGAGCTTTAATGCTATTCAAGGGGATTGTGTCTCTATGTACCTCAGAGAGAAGCAAAACCTATTGAATCTTATTGATGGGATTCCTGGACGAGTCAACCTCACCTTGgacttatggacttcaaaccaaacatcggcctatgtttttgttcgagggcacttcattgatggtgattggaacttacatcatcctatacttaatGTATTCATGGTACCATTTCCTGATTCTGATGGTTCCTTAAATCAAACTATAGTGAACTGCCTAAGTGATTGGCATTTGAAGGGTCGGCTATTTACTCTTGCACTTGATAAATTCTTCTCCAATGAGACTTTGATGGGAAAGCTGAGAAGTCTCCTCTCTGTTAATAACCCTGTGATCCTCAATGGTCAATTGTTAAGCCAGAACTGTTATGCTCGTATGCTTAGTCGCCTTGCATTAGATGCACTATCAGCTATGGGAGAAACTATTGATAAAGTTCGGGAGAGTGTAAAGTATGTGAAATCTTCTAAGTCTAATGAAGGGAATTTTTTGAATCTGAGGCAACAACTTCAAGTCCCTAGTACGACGAACCTTTTAATTGATGACCAAAATAAATGGGACACAATATACCACATGCTTGTTGCTGCTTGTGAATTAAAGGAAGTTTTTGCTTGCTTTGATGCCTCTAATCCTGATTTCAGAGCAACTCTAACATTGGATGACTGGAAGCAGGTGGAAAAACTCTGTGCATATCTGAAGTACTTGTATGATGCAGCTAACATTTTAACTTTTCAACCATACCCAACTGCAAATGTATTTTTCCTTGAAGTGTCCAAACTTCAGGTGGAGTTGACTTGTGCTGCCTTAAGCCAGGATCCTTTCTGTAGTCGTTTGATTATGCCTTTGCAAgagaagtttgaccaatattggagagaaagctgcttggtcttggctgttgctgtagccatggatccaagatataaaatgaaaattgtggaatccacttttgctaagatatttggtgagaatgctgACCAATGGATAAGAATTGTTGAGGATGGTCTTCAAGAGCTGTTCCTTGAATATAATATCATACAAGTGCTTCCTTTTGCAGCAACAAATGATGATGAAGGGAATGAGGCTATGATAAAGACTGAGACATCTCAAGAATTTGATGGATCTCTTTTTGGTGCTGATGATGGACTTTCTGATTTTGAATTTTATATATCCGATTTTACATGTAACCAGCAATTTAAGACGGAATTGGATGAATATCTTGAAGAGCCTCTAGAACCCAGAGTACAAGAATTTGATATTCTGAGCTGGTGGAGAATAAACGGATTGAAGTACCCAACATTGTCTAGACTAGCATCTGATATTTTGTGTATGCCAATATCCACCCTCTCTGCAGATGCTGTTTTTGATACAGAAATTAGAAAAATGGATAGCTACCGGACTTCATTAGACTCCTTGACTCTTGAGGCCCTTATTTGTACCAAGGACTGGTTCCAGTATAAATCATTACCCATGAATGTTCCAAATGCACTTGTCAAAGTTGAATGTTAG 2145 0.3576 MPHIGLGVLVVISKAKASCTLMALPFHSNTFVRSFTAFSSLGYVRRRSPERIQPSVMSMEYDIPDSEIQQNSRRRKKSTVWEHFTVKMDGPGCARAYCKRCQKSFAYLKDSKQSGTSHLKRHITLGICQKNQRIPCSKTDANPPKKRARAKPCFAAISFDQERCNSKIAKMIILHDYPLHIVEHQGFIDFVRALQPQFNPLSFNAIQGDCVSMYLREKQNLLNLIDGIPGRVNLTLDLWTSNQTSAYVFVRGHFIDGDWNLHHPILNVFMVPFPDSDGSLNQTIVNCLSDWHLKGRLFTLALDKFFSNETLMGKLRSLLSVNNPVILNGQLLSQNCYARMLSRLALDALSAMGETIDKVRESVKYVKSSKSNEGNFLNLRQQLQVPSTTNLLIDDQNKWDTIYHMLVAACELKEVFACFDASNPDFRATLTLDDWKQVEKLCAYLKYLYDAANILTFQPYPTANVFFLEVSKLQVELTCAALSQDPFCSRLIMPLQEKFDQYWRESCLVLAVAVAMDPRYKMKIVESTFAKIFGENADQWIRIVEDGLQELFLEYNIIQVLPFAATNDDEGNEAMIKTETSQEFDGSLFGADDGLSDFEFYISDFTCNQQFKTELDEYLEEPLEPRVQEFDILSWWRINGLKYPTLSRLASDILCMPISTLSADAVFDTEIRKMDSYRTSLDSLTLEALICTKDWFQYKSLPMNVPNALVKVEC 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03286 714 Pfam hAT family C-terminal dimerisation region 614 696 IPR008906 GO:0046983
Gma13g03286 714 SUPERFAMILY beta-beta-alpha zinc fingers 78 125 IPR036236 -
Gma13g03286 714 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 62 704 - -
Gma13g03286 714 PANTHER BED FINGER-RELATED 62 704 IPR045259 -
Gma13g03286 714 Pfam Domain of unknown function (DUF4413) 459 555 IPR025525 GO:0003677
Gma13g03286 714 SUPERFAMILY Ribonuclease H-like 225 698 IPR012337 -
Gma13g03286 714 ProSiteProfiles Zinc finger BED-type profile. 75 128 IPR003656 GO:0003677
Gma13g03286 714 SMART bed5 75 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03286 Gma-Chr13 46804331 46808623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03286 - - gmx:106795554 1333.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03286 13 46804331 46808623 Gma13g03286 13 46804331 46808623 ECH
Gma13g03286 13 46804331 46808623 Gma15g00064 15 560346 565183 GST
Gma13g03286 13 46804331 46808623 Gma07g00271 07 2378639 2385214 PCT
Gma07g00271 07 2378639 2385214 Gma13g03286 13 46804331 46808623 PCT