Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01737 ATGTCAGGTGGTGGATGCAGCATAGTGTGGTTCAGGAGAGATCTGAGGGTGGAGGATAACCCTGCACTGGCTGCAGGAGTGAGAGCAGGTGCTGTGGTTTGTGTCTTCATTTGGGCTCCTGAGGAAGAGGGTCAATACTACCCTGGAAGGGTCTCTAGGTGGTGGCTCAAACAAAGCTTGGCTCACCTTGATTCCTATCTGAGAAACCTTGGCTCCCCTCTAATCACCAAACGTTCCACTAATAGTATTTCTTCTCTCTTGGAGGTTGTTAAGTCCACCGGGGCTACCCAACTCTTTTTCAACCATTTATATGATCCGTTGTCACTTGTGAGGGATCACAAAGCAAAGGAGGTTCTGACGGCTCAAGGCATTACCGTACGTTCCTTCAACTCGGACTTGTTGTATGAGCCATGGGATGTGAATGATGCTCATGGCCAACCATTCACAACTTTTTCTGCTTTTTGGGAAAGATGCCTTAGCATGCCTTATGACCCACAAGCACCTCTTCTCCCACCTAAAAGGATTATTCCAGGTGATGTATCAAGGTGCCCTTCTGATACATTGGTGTTTGAAGACGAATCGGAAAAGGCAAGCAATGCGCTTCTTGCTCGAGCATGGTCACCCGGGTGGAGCAATGCTGATAAGGCATTGGCAGCATTTGTAAACGGTGCTCTAATCGAGTACTCGAAGAATCGCAGGAAGGCTGACAGTGCCACAACCTCATTTCTCTCACCACATTTGCACTTTGGTGAGGTGAGTGTGAAGAAAGTGTTCCACCTTGTCCGCATCAAGCAAGTGTTTTGGGCCAATGAAGGAAACAAGGCTGGTGAAGAGAGTGTGAACTTGTTTCTCAAGTCTATTGGTCTTAGAGAGTATTCAAGGTACATTAGTTTCAACCACCCTTATAGTCATGAGAGGCCCCTTCTAGGCCACCTTAAGTTTTTCCCTTGGGTGGTGAATGAAGGGTACTTTAAGGCTTGGAGACAAGGCAGAACAGGTTACCCTTTGGTAGATGCTGGCATGAGAGAGTTGTGGGCAACTGGTTGGTTGCATGATCGAATACGTGTTGTGGTTTCAAGTTTCTTTGTGAAGGTGCTGCAGCTTCCTTGGAGATGGGGAATGAAGTATTTCTGGGACACCCTTTTGGATGCAGATCTTGAGAGTGATGCTCTTGGTTGGCAGTACATATCTGGCACTCTCCCTGATGGTCGCGAATTTGACCGAATAGATAATCCACAGTTTGTGGGCTACAAATGTGACCCAAATGGAGAATATGTGCGACGCTGGCTTCCTGAACTTGCTAGATTACCAACTGAATGGATACACCATCCATGGAATGCACCAGAGTCTGTACTCCAAGCTGCTGGAATTGAACTTGGTTCAAATTATCCTCTTCCCATTGTGGGAATAGATGCAGCAGAAGTAAGACTGCAAGAAGCACTTATTCAAATGTGGCGACAAGAAGCAGCTTCAAGAGCTGCAATGGAAAATGGAACCGAGGAAGGGCTTGGAGACTCATCTGAATCAGCCCCTATTGCCTTTCCTCAAGACATACAAATGGAGGAAAGGCCTGAACCTGTTAGGAACAACCCACCTCACGGTACTCGGCGCTACCAGGATCAGATGGTCCCAAGTATTACTTCTTCCCATGTGAGAGTGGAAGAGGAAGAAACATCTTCAGACCTTCGAAACTCGGCTGCAGACAGCAGAGCCGAAGTGCCTATAAATGTAACCACACAACAAAATGCAAGAGAGACAGTGAATCAAGGGGTGTTACTGAATACAAATAGAAACACTCGAGTACAGAATAATCCTACAACGTGGCTGAGAAATGCAGCTGAAGATTCCACAGCAGAATCTTCAAGTAGTACTAGGAGAGAAAGGGATGGGGGTGTAGTTCCAGTATGGTCCCCCCCAGCTTCTAATTTCTCAGAACAATTTGTAGATGATGAAAATGGTATAGGAACCGGTTCATCTTACTTGCAAAGGCAGCATCCTCAGTCTCATCAATTGATGAACTGGACACGGCTACCTCAGACTGGGTAA 2046 0.4673 MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVCVFIWAPEEEGQYYPGRVSRWWLKQSLAHLDSYLRNLGSPLITKRSTNSISSLLEVVKSTGATQLFFNHLYDPLSLVRDHKAKEVLTAQGITVRSFNSDLLYEPWDVNDAHGQPFTTFSAFWERCLSMPYDPQAPLLPPKRIIPGDVSRCPSDTLVFEDESEKASNALLARAWSPGWSNADKALAAFVNGALIEYSKNRRKADSATTSFLSPHLHFGEVSVKKVFHLVRIKQVFWANEGNKAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFVGYKCDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAEVRLQEALIQMWRQEAASRAAMENGTEEGLGDSSESAPIAFPQDIQMEERPEPVRNNPPHGTRRYQDQMVPSITSSHVRVEEEETSSDLRNSAADSRAEVPINVTTQQNARETVNQGVLLNTNRNTRVQNNPTTWLRNAAEDSTAESSSSTRRERDGGVVPVWSPPASNFSEQFVDDENGIGTGSSYLQRQHPQSHQLMNWTRLPQTG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01737 681 Gene3D HUPs 8 206 IPR014729 -
Gma14g01737 681 MobiDBLite consensus disorder prediction 519 538 - -
Gma14g01737 681 MobiDBLite consensus disorder prediction 594 681 - -
Gma14g01737 681 ProSitePatterns DNA photolyases class 1 signature 2. 352 371 IPR018394 -
Gma14g01737 681 MobiDBLite consensus disorder prediction 594 619 - -
Gma14g01737 681 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 301 502 - -
Gma14g01737 681 Pfam Blue/Ultraviolet sensing protein C terminal 510 625 IPR020978 -
Gma14g01737 681 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 5 134 IPR006050 -
Gma14g01737 681 PANTHER CRYPTOCHROME-1 1 603 - -
Gma14g01737 681 Pfam FAD binding domain of DNA photolyase 283 480 IPR005101 -
Gma14g01737 681 MobiDBLite consensus disorder prediction 548 571 - -
Gma14g01737 681 TIGRFAM crypt_chrom_pln: cryptochrome, plant family 6 481 IPR014134 GO:0009785|GO:0009882
Gma14g01737 681 MobiDBLite consensus disorder prediction 639 681 - -
Gma14g01737 681 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 194 487 IPR036134 -
Gma14g01737 681 PRINTS DNA photolyase signature 143 159 IPR002081 -
Gma14g01737 681 PRINTS DNA photolyase signature 332 348 IPR002081 -
Gma14g01737 681 PRINTS DNA photolyase signature 352 370 IPR002081 -
Gma14g01737 681 PRINTS DNA photolyase signature 391 405 IPR002081 -
Gma14g01737 681 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 178 IPR036155 -
Gma14g01737 681 PANTHER CRYPTOCHROME 1 603 IPR002081 -
Gma14g01737 681 ProSitePatterns DNA photolyases class 1 signature 1. 332 344 IPR018394 -
Gma14g01737 681 Gene3D - 134 293 - -
Gma14g01737 681 Pfam DNA photolyase 7 163 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01737 Gma-Chr14 47067714 47073478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01737 K12118 - gmx:100786551 1379.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01737 14 47067714 47073478 Gma14g01737 14 47067714 47073478 ECH
Gma14g01737 14 47067714 47073478 Gma04g00936 04 9485648 9489210 PCT
Gma14g01737 14 47067714 47073478 Gma06g00918 06 8478602 8484040 PCT
Gma04g00936 04 9485648 9489210 Gma14g01737 14 47067714 47073478 PCT
Gma06g00918 06 8478602 8484040 Gma14g01737 14 47067714 47073478 PCT