Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01724 ATGaGAAATGAAGAACTAGGAACTTGGTTGAACGGGTTTTCCAACAACAACAGCATCCTTCACCGTGGCCACGTCACCTCACCACCACAACCTCAACCTTCTTCGAGTGTTTTCTCCATGATCCATGATGATGGTGTTGATATTGATGCGATGCTGTGTAGTGATTTTGCTAGAATGAGTGTTTTTCACGAACTAGGGAATGTTGGTGCCAAAACCAGAGGATATGGTGCTAATGTTATGGATTCATCATACCCACATGCATTCTTAAACTCACACTCACCTTGTTCTTTTGATGCACATGCACATGTTCATGAAGAAATGGGTACCCCATTACCTACTTGGGGTGTTTCAGTTCCTTCTGATGTGAAGGGACACACTTTTGGACCCCCAATGGAGTCTTCTTCTCATACCCAAAGGAGCAACACTTGCTATGGGCACGTTCCACTGCAAAACCCATTTCATGCTACAAGGCCTTTTGTAGTGGATTGTGATGTGAAAAAACCCATTGTGTTCTCTCAAAGTCAAACCATGATGCAACCAAAGATTGCTATGAATGTAAACACGCCATCATCACATTGTTTCCCTGCAGCAAAAGAAAGAGGAACAACAAGTGTAGCTGTAACCACCAATGGTGATTTTTCTCACTCTAGAGGGAACACTTTGGGGTTTCAATTTGACGGTGGTTTTGTCCTACAAGAGAAGAATGTAAAATGCTATGCTGGTAGAGGATGTCATTCTTTGTGGGGTTGCAAAGAGAGTTTACCTTTACTAGTTCAACAAGCAGTGGGAGAGGAACTTCCTCAACTCATTCCTCCTCGTGTTGCTCCCACTAGACATGAAAAGAATGGCATTCTCGCCAGCGATGTTTCGCTTTCTCTGCGGCCATTGTTGTACAATTTTAGTCCTTTGTCTAAGTTCCATGGCTACATTTACTACCTGGCTAAGCACCAGAACGGTTGCCGCTTCCTGCAGAGGATGATTGATGAGGGCACCTCTGAACATGTGCTAATAGTGTTCAATGGAGTCATAGATGATGTTGTTGAGCTTATGGTGGACCCTTTTGGCAACTACCTTGTGCAGAAGTTGCTTGATGTGGGCGGAGATGATGAAAGGTTGCAGGTTGTGTCAATGTTGACAAAAGAACCAGGGCAGCTAATCAAAACCTCTTTGAATATACACGGGACTCGGGTGGTTCAGAAGCTGATCACGACTGTCGACTCTAGAAAACAAATTGCAATGCTTATGTCTGCTATTCAATCTGGTTTTCTTGCTCTTATTAAGGATCTAAATGGGAATCATGTCATACAGCGTTGCTTGCAATACTTTAGCTGTAAAGATAATGAGTTTATTTTTTATGCTGCTACAAAGTTTTGTGTGGAGATAGCTACTCATCAACATGGGTGTTGTGTATTACAACGTTGCATTGATTATTCCACCGGAAAATACCAAGATAAACTGGTAAAGGAAATATGCAGACATGGGCTTCTACTTGCTCAAGATCCATTTGGAAATTATGTTGTTCAGTATATTATAGAGATGGAGAACCCAACTGCCTCATTCAAACTGCATTCTCAGTTCAAAGGGAACTACACCAACCTCTCAATGCAAAAATATAGCAGTCATGTGGTTGAAAAATGCCTCGTGCATCTTGCAGAGATCAAGTCAAGGATAGTCCAAGAATTTTTATCTTTTCCTCACTTTGAGCAGTTGCTACAAGACCTATATGGCAACTATGTTGTTCAACGTGCTCTCGGAGTGACCAAGGGCTTTCTGCATGCATCTCTAGCTGAAGCAGTTCGCCCCTACAAAATGTTGCGCACCAGCCCTTATTGCAAAAGGGTTTTCTCGAGGAACCTGCTTAACAAGTGA 1869 0.4259 MRNEELGTWLNGFSNNNSILHRGHVTSPPQPQPSSSVFSMIHDDGVDIDAMLCSDFARMSVFHELGNVGAKTRGYGANVMDSSYPHAFLNSHSPCSFDAHAHVHEEMGTPLPTWGVSVPSDVKGHTFGPPMESSSHTQRSNTCYGHVPLQNPFHATRPFVVDCDVKKPIVFSQSQTMMQPKIAMNVNTPSSHCFPAAKERGTTSVAVTTNGDFSHSRGNTLGFQFDGGFVLQEKNVKCYAGRGCHSLWGCKESLPLLVQQAVGEELPQLIPPRVAPTRHEKNGILASDVSLSLRPLLYNFSPLSKFHGYIYYLAKHQNGCRFLQRMIDEGTSEHVLIVFNGVIDDVVELMVDPFGNYLVQKLLDVGGDDERLQVVSMLTKEPGQLIKTSLNIHGTRVVQKLITTVDSRKQIAMLMSAIQSGFLALIKDLNGNHVIQRCLQYFSCKDNEFIFYAATKFCVEIATHQHGCCVLQRCIDYSTGKYQDKLVKEICRHGLLLAQDPFGNYVVQYIIEMENPTASFKLHSQFKGNYTNLSMQKYSSHVVEKCLVHLAEIKSRIVQEFLSFPHFEQLLQDLYGNYVVQRALGVTKGFLHASLAEAVRPYKMLRTSPYCKRVFSRNLLNK 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01724 622 ProSiteProfiles Pumilio RNA-binding repeat profile. 305 340 IPR001313 GO:0003723
Gma14g01724 622 Pfam Pumilio-family RNA binding repeat 388 418 IPR001313 GO:0003723
Gma14g01724 622 Pfam Pumilio-family RNA binding repeat 567 584 IPR001313 GO:0003723
Gma14g01724 622 Pfam Pumilio-family RNA binding repeat 422 451 IPR001313 GO:0003723
Gma14g01724 622 Pfam Pumilio-family RNA binding repeat 458 491 IPR001313 GO:0003723
Gma14g01724 622 Pfam Pumilio-family RNA binding repeat 346 377 IPR001313 GO:0003723
Gma14g01724 622 Pfam Pumilio-family RNA binding repeat 531 560 IPR001313 GO:0003723
Gma14g01724 622 Pfam Pumilio-family RNA binding repeat 310 340 IPR001313 GO:0003723
Gma14g01724 622 Pfam Pumilio-family RNA binding repeat 496 512 IPR001313 GO:0003723
Gma14g01724 622 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 6 622 - -
Gma14g01724 622 ProSiteProfiles Pumilio RNA-binding repeat profile. 489 524 IPR001313 GO:0003723
Gma14g01724 622 ProSiteProfiles Pumilio RNA-binding repeat profile. 417 452 IPR001313 GO:0003723
Gma14g01724 622 SUPERFAMILY ARM repeat 303 616 IPR016024 -
Gma14g01724 622 Gene3D - 296 620 IPR011989 -
Gma14g01724 622 SMART pum_5 305 340 IPR001313 GO:0003723
Gma14g01724 622 SMART pum_5 341 376 IPR001313 GO:0003723
Gma14g01724 622 SMART pum_5 417 452 IPR001313 GO:0003723
Gma14g01724 622 SMART pum_5 380 416 IPR001313 GO:0003723
Gma14g01724 622 SMART pum_5 562 597 IPR001313 GO:0003723
Gma14g01724 622 SMART pum_5 453 488 IPR001313 GO:0003723
Gma14g01724 622 SMART pum_5 489 523 IPR001313 GO:0003723
Gma14g01724 622 SMART pum_5 525 559 IPR001313 GO:0003723
Gma14g01724 622 PANTHER PUMILIO-FAMILY RNA-BINDING REPEATPROTEIN 6 622 - -
Gma14g01724 622 CDD Pumilio 299 617 IPR033712 GO:0003723
Gma14g01724 622 ProSiteProfiles Pumilio RNA-binding repeat profile. 560 597 IPR001313 GO:0003723
Gma14g01724 622 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 280 622 IPR033133 GO:0003723
Gma14g01724 622 ProSiteProfiles Pumilio RNA-binding repeat profile. 377 416 IPR001313 GO:0003723
Gma14g01724 622 ProSiteProfiles Pumilio RNA-binding repeat profile. 453 488 IPR001313 GO:0003723
Gma14g01724 622 ProSiteProfiles Pumilio RNA-binding repeat profile. 341 376 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01724 Gma-Chr14 46766716 46771461 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01724 - - gmx:100788865 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01724 14 46766716 46771461 Gma14g01724 14 46766716 46771461 ECH
Gma14g01724 14 46766716 46771461 Gma04g00947 04 9671196 9674561 PCT
Gma14g01724 14 46766716 46771461 Gma06g00927 06 8560799 8564101 PCT
Gma04g00947 04 9671196 9674561 Gma14g01724 14 46766716 46771461 PCT
Gma06g00927 06 8560799 8564101 Gma14g01724 14 46766716 46771461 PCT