Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01192 ATGACTAGACCAACAACTCGAAGTAAAAATAAAAGGCAGAGACAGGGGGATGATGATGGTGGTGGCACTTCTGACATATGGAGGAAAATTCACATAACGGGTGCGGTGACTGAAGATGATATGAATCAACTGTATATGATTTGGAAGCCAGTCTGTTCAGGCTGTCGTGTTAATACTAAAGACAACCCGAATTGCTTCTGTGCATTGGTTCCACCTGCGAATGGTACCCGAAAGTCTGGTTTATGGCAGAAGATGGCCGACTTTGTCGAAAGTCTTGGTCCCGACCCAAATATGGATCTTCGTGTTTCTGATAGTTCACCTGCAGGTCTGACAAATCTTGGCGCAACATGCTATGCCAACAGTATACTACAGTGCTTGTATATGAATAAATCTTTCCGAGAAGGCATATTTTCTGTAGAACCGGATGTTTTACAACAACAACCAGTGTTAGATCAACTGACTCAACTTTTTGTACATTTGCATGCTAGTAAAATGGCTTTCATAGATTCTTCTCCATTTGTAAAAACATTGGAGCTAGACAATGGAATTCAGCAGGATAGCCACGAGTTCTTGACATTGCTTCTGTCATTACTTGAGCGTTGTTTGAGCCATTCCAAAATTGCCAAGGCAAGAACAATAGTTCAAGATCTTTTTCGAGGAAGTGTGTCTCATGTGACAACGTGTTCGCAATGTGGAAGAGACTCTGAGGCTTCTTCCAAAATGGAAGACTTCTATGGGTTAGAGTTGAATATCAAGGGACTGAAAGGTTTAGATGAGAGCCTAGATGATTATCTTGCTATTGAAGAGCTTCATGGAGACAATCAATATTTCTGTGAGTCATGTAAAACAAGAGTTGATGCTACTCGCAGCATCAAGCTGTGTACATTGCCTGATGTACTTAATTTTCAACTTAAACGTTATGTCTTCCTTCCACAGAATACAATGAAGAAGAAAGTTACTTCTGCATTTTCATTTCCTGCTGAACTTGATATGCGCCATAGATTGTCTGAGCCATCTCAGTTTGAATTGATATATGACTTGTCAGCTGTACTGATTCACAAAGGAACTGCTGTTAATAGTGGTCATTACATTGCCCATATCAAGGATGTAAACACTGGGCAATGGTGGGAGTTTGATGACGAGAATGTTACTAACTTGGGTTGCCATCCATTTGGGGAAGGAACTTCTTCTACTTCTAAATCTGTTAAGACAGATGTACTTCATTCTAATTGCTCTGAAGCAATGCTAGCTGACAGTAATGGTTTAGATGCCACTCATGCGCAATCTTTGCTTGTGGAGACATTTTCATCTAGTGATGCTTACATGTTGATGTACCATCTTAAGCATAGCAAAAATGTTGGTGAAAAGGGGGGAATCGTTTATGGTGCTAACCTTGAAGTAGAGGGCAATGCAGTTACTGCACAAGACAGTGCTTGTCTTCCTTCTCATTTTTGCAAAGAGATTCAAAATTTCAATGCTTCATATCTTGATTCTTGCGAGCAGTACAAACATAGGAAAGAGTTAGAATTGAGCCATATCAATGAGAGGAGACAGGAAGTTCGATCCATTTTAGCTGAAGCTCCTACTCAACCACTGGAGCAACCGTATTTTTGGATTTGTAGTGACTGGCTTCGCCAGTGGGCTGACAACATTATTCCAATTGCTCTTGACAATACATCTATCCAATGTTCACATGGGAAAGTCCCAGTGTCAAAGGTTACCTCAATGAAGCGATTATCTTCTAAAGCATGGGATAAATTATTGTCTAAGTATGGTGGGGGACCAACTCTTTCTCATGAAGACTGTTGTTGGGATTGTCTGATTGATGGGGCTCAGAATGTGGTGTCAGCTGACACTTATCGGGATCAAAGAGAATCATTGAAGCGACTTGCACGGGATATTCTCGATGGAAATTGTGAAGACGGAATGTACTATGTGTCTAGACCATGGTTGCAGCAATGGTGGAAAAGAAAAGTTGTTGATGCTCCATCTGAAGCTGATGCTGGACCAACAGCAGCCATTTGTTGTCCACATGGGCAACTTATGCCTGAGCAAGCTGTTGGTGCTAAGCGGTTGCTTGTTCCTGAGGATTTCTGGCTTTTCTTATATAAAGATGCCATTTCTGTAAAACCTGATGATCCTCTAGGTTGCCCTACTTTTCCTTTAGACTCCAGAAGGTGTTCCCAATGCAGTGATGAATTATCTGAAGAGGCTTGCTTGGAGGACTCTTTGAGATTAGTAAAACAAATGCAACGCCAAAATCATGAGAAATTATTTGTTGGTAAAAGTATGCCGCTTTCTCTACATTGCAAGTATTTCTTAGTTCCTTCTTCGTGGATTTCAAAATGGAGAAATTACATTAATTTGGCTGTCAAGAATTCAGATAAACCTGAAACTTTAGATGGGGTAATCGATTCACTGATGTGTGAAAAGCATTCACGGCTCATTGAAAGGCCTCCTGAACTGGTTTTCAGACGTGGTGCTATAATTGCCAGAGAATCTTCTGTAAGTGGCTTAACCATCATATCTGAGAATGATTGGAAATGCTTCTGTGAAGAATGGAGTGGTATTGAGACCAAAGGAATATCTGCAAGAATTGAGAATGTTAATGATTCAGAAAATGCTTTGACTGGATCCTGCAGAGAGATGCCAATATGTGAGGATCAACTTAACACTTGGGATAAAGTGAATAATGAAAGTGGGAATGGACACATTGTGATTAAGACTTGTCCTGAGGTTTGTGAAAGTTGCGTTGGAGAAAAGGAAAGCTGTGAGTTAATGCAGAAACTTAACTATTGCAATCAGGACATTAGTGTAATTCTTGTCCGTGGAAAGGAGGTCCCTAAATCAATCTTAGAGGCTTCAAAGGGCTTTGTTGAAATAGACAGGCGGGTTTCCAAACGTTCCCGGAAGACTAAAAATGGGAGTTCCATTAGTCTAAAAGTTTCTGCTTCAACATCTATTTACCAGCTGAAAATGATGATATGGGAATCCTTTGCGGTTGTCAAAGAAAACCAGATACTACAAAAAGGTGATAGAACAATTGATGTTGATAATGAATATGCTACGCTTGTGGATGCAAACATATTTGCTGGAGATCAGATTATTGTGAGGGACTCCGAGATCCATGAAAATCGAGATATTGCAGATGAGCTTTGTGATGAGGAAATGGAAACACAACATACCGAGGCAGGATTTCGTGGAACACTCTTAACATCGAACGTTTCATCTCAGGTGGTTTAG 3243 0.4049 MTRPTTRSKNKRQRQGDDDGGGTSDIWRKIHITGAVTEDDMNQLYMIWKPVCSGCRVNTKDNPNCFCALVPPANGTRKSGLWQKMADFVESLGPDPNMDLRVSDSSPAGLTNLGATCYANSILQCLYMNKSFREGIFSVEPDVLQQQPVLDQLTQLFVHLHASKMAFIDSSPFVKTLELDNGIQQDSHEFLTLLLSLLERCLSHSKIAKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYGLELNIKGLKGLDESLDDYLAIEELHGDNQYFCESCKTRVDATRSIKLCTLPDVLNFQLKRYVFLPQNTMKKKVTSAFSFPAELDMRHRLSEPSQFELIYDLSAVLIHKGTAVNSGHYIAHIKDVNTGQWWEFDDENVTNLGCHPFGEGTSSTSKSVKTDVLHSNCSEAMLADSNGLDATHAQSLLVETFSSSDAYMLMYHLKHSKNVGEKGGIVYGANLEVEGNAVTAQDSACLPSHFCKEIQNFNASYLDSCEQYKHRKELELSHINERRQEVRSILAEAPTQPLEQPYFWICSDWLRQWADNIIPIALDNTSIQCSHGKVPVSKVTSMKRLSSKAWDKLLSKYGGGPTLSHEDCCWDCLIDGAQNVVSADTYRDQRESLKRLARDILDGNCEDGMYYVSRPWLQQWWKRKVVDAPSEADAGPTAAICCPHGQLMPEQAVGAKRLLVPEDFWLFLYKDAISVKPDDPLGCPTFPLDSRRCSQCSDELSEEACLEDSLRLVKQMQRQNHEKLFVGKSMPLSLHCKYFLVPSSWISKWRNYINLAVKNSDKPETLDGVIDSLMCEKHSRLIERPPELVFRRGAIIARESSVSGLTIISENDWKCFCEEWSGIETKGISARIENVNDSENALTGSCREMPICEDQLNTWDKVNNESGNGHIVIKTCPEVCESCVGEKESCELMQKLNYCNQDISVILVRGKEVPKSILEASKGFVEIDRRVSKRSRKTKNGSSISLKVSASTSIYQLKMMIWESFAVVKENQILQKGDRTIDVDNEYATLVDANIFAGDQIIVRDSEIHENRDIADELCDEEMETQHTEAGFRGTLLTSNVSSQVV 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01192 1080 ProSiteProfiles DUSP domain profile. 511 603 IPR006615 GO:0004843
Gma14g01192 1080 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1050 - -
Gma14g01192 1080 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 108 448 IPR028889 -
Gma14g01192 1080 CDD Ubl_USP48 970 1073 IPR044743 GO:0004197|GO:0004843|GO:0016579
Gma14g01192 1080 CDD Peptidase_C19L 109 445 IPR033841 GO:0004843
Gma14g01192 1080 ProSiteProfiles DUSP domain profile. 618 720 IPR006615 GO:0004843
Gma14g01192 1080 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1050 - -
Gma14g01192 1080 Gene3D - 742 863 IPR035927 -
Gma14g01192 1080 ProSiteProfiles DUSP domain profile. 746 866 IPR006615 GO:0004843
Gma14g01192 1080 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 109 124 IPR018200 GO:0004843|GO:0006511
Gma14g01192 1080 SMART dusp 529 605 IPR006615 GO:0004843
Gma14g01192 1080 Coils Coil 1079 1080 - -
Gma14g01192 1080 MobiDBLite consensus disorder prediction 1 24 - -
Gma14g01192 1080 Gene3D Cysteine proteinases 97 448 - -
Gma14g01192 1080 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 345 363 IPR018200 GO:0004843|GO:0006511
Gma14g01192 1080 Pfam Ubiquitin carboxyl-terminal hydrolase 109 445 IPR001394 GO:0004843|GO:0016579
Gma14g01192 1080 SUPERFAMILY Ubiquitin-like 973 1039 IPR029071 -
Gma14g01192 1080 MobiDBLite consensus disorder prediction 10 24 - -
Gma14g01192 1080 Gene3D - 969 1040 - -
Gma14g01192 1080 SUPERFAMILY DUSP-like 515 602 IPR035927 -
Gma14g01192 1080 SUPERFAMILY Cysteine proteinases 107 448 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01192 Gma-Chr14 19036402 19045426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01192 106 386 Miscellaneous Gene Families AT4G31670 29.766 6.85e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01192 - - gmx:100795556 2170.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01192 14 19036402 19045426 Gma04g00677 04 6276503 6291421 PCT
Gma14g01192 14 19036402 19045426 Gma06g00671 06 6092899 6103663 PCT
Gma04g00677 04 6276503 6291421 Gma14g01192 14 19036402 19045426 PCT
Gma06g00671 06 6092899 6103663 Gma14g01192 14 19036402 19045426 PCT