Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00671 ATGAGTAGACCGACAACACGGAGTAAAAATAAAAGACAGAAACAAGGGGATGATGGCAACGGCACTGGCGAAATATGGAGGAAAATTCATAATACAGGTGTGGTAACTGAGGATGATATGAATCAATTGTATATGATTTGGAAGCCAGTTTGTTCAGGCTGCCGTGTCAATAATAAAGATAACCCAAATTGCTTATGTGCATTGGTTCCACCTCCAAATGGAGCCCGGAAGTCTGGCTTATGGCAAAAGATGTCAGATATTGTTGAGAGTCTTGGCCATGACCCAACCAAGGATCTTCGAGCTTCTGCTGATTCTCCTGCAGGTCTCACGAATCTTGGTGCAACATGCTATGCCAACAGTATACTCCAGTGCTTGTACATGAATAAATCTTTCCGAGAAGGCATGTTTTCTGTAGAACGAGATGTTTTACATCAACAGCCTGTGCTAGATCAGCTGGCTCGACTGTTTGTGCAGTTGCATATTAGCAAAATGGCTTTCATAGATTCTTCTCCATTTGTAAAAACTCTGGAATTAGATAATGGAGTTCAGCAGGATAGCCATGAGTTCCTGACATTGCTTCTCTCTTTGCTTGAGCGTTGTCTGAGCCACTCCAAAGTGCCCAAGGCAAGAACAATAGTTCAAGATCTTTTCCGGGGAAGTGTTTCTCATGTGACGACGTGCTCAAAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAATGGAAGATTTCTATGAATTGGAGTTGAATGTCAAAGGATTGAAAAGTTTAGATGGGAGCCTAGATGAATATCTCACTGTTGAAGAGCTTAATGGAGACAATCAATATTTTTGTGAGTCTTGTAAAACAAGAGTTGATGCTACTCGCAGCATCAAGCTGTGTACATTACCCAAAGTACTTAATTTTCAGCTTAAACGTTATGTCTTCCTTCCTAAGACTACAACAAAGAAGAAAATTACTTCTGCATTTTCATTTCCTGCTGAACTTGATATGCGGCATAGAATGTCTGAGTTGTCTCAGTTCAACTTGGTATATGACTTGTCAGCTGTACTGATTCACAAGGGAACTGGTGCTAATAGTGGCCATTACATTGCTCACATCAAGGATGTAAACACTGGACAATGGTGGGAATTTGATGATGAGCATGTTACTAATTTGGGTTTTCATCCATTTGGTGAAGAGTCTTCAAGTTCTACTACTAAATCCATCAAGACTGATGCAATTCATTTTGATAATTCTGAAGCAATGGTAGCTGACAGCAATGGAAATGGTTTAAGTGCTACTCATTCACAATCTTCAAAAGTGGAGACATTTTTGTCTAGTGATGCGTACATGTTGATGTACCATCTTAAACATACAAAAAGTGTTGGTAAAAGTGGGGGTGTAATTTGTGGTGTTAACCATAAAGAAAGAGAGGGTGTTGTAGTTGCTGTGCAAAATGGTGTTCCTCTTCCATCTCATATTTATGATGAGATTCAAAGTTTCAACACCTCATATGATGATGCTTGTCAGCAGTACAATAACAGGAAAGAGTTACAATTGAGTCGTATTAGTGAGAGGAGACAGGAAGTTCGATCTGTTTTAGCTGAAGCTCCTGTGCAATCATTGGAGCAACCATTTTATTGGATTTCTAGTGAATGGCTTCGTCAATGGGCCGACAACATTATTCCAATTCCTCTTGACAACACGTCAGTCCAATGCTCACATGGGAAAGTCCCAGTTTCAAATGTTACCTCAATGAAGCGGTTGTCTGCTAAAGCGTGGGATATGTTGTTCTCCAAGTATGGTGGAGGACCAGCATTGTCTCATGATAACCACTGTCGGGATTGCCTGATTCATGGGGCTATGACAGTGGTGTCAGCTGACACCTATCGGGATAGAAGAGAATCAATGAAGTCACTTGCACGGGATATTCTAGATGGAAACTGCCTAGATGGAAAGTATTACATATCCAGACCATGGTTGCAGCAGTGGTGGAAAAGAAAAGTCCTTGATGCTCCATCTGAAGCTGATGCTGGACCAACAGCAGCCATTAGTTGTCCACATGGTCAATTGATGCCTGAGCAAGCTCCTGGTGCTAAGCGGGTGCTTATTCCTGAGAGCTTTTGGCTCTTCTTATATGAAGATGCTGTTTCTGTAACGCCTGATGATCCTTTGGGTGGCCCAACTTTTTCTTCAGATTCTGAAGAGTGTTCCCAATGCAGTAATGAATTATCTGAAGTAGCATGCTTGGAGGACTCCTTGAGATTAGTTAAACAAAAACAACGTCAGAATCATGAGAAATTATTCCAGGCTAAAAGTATGCCACTTTCTATGCACAGCAAGTATTTCTTGGTGCCTTCGTCATGGATTTCAAAATGGAGAAATTACATTAGTCCAACCCTGAAGAATTCAGATAAACCTGAAACTTTAGATGGGGTAATTGATTCAATGTTGTGTGAAAAGCACTCACAGCTGATTGAAAGACCTCCTGAATTGGTTTTCAGACGTGGTGCTATAATCCAGAGGGAATCTTCTGTAAGTTGCTTAACCATTGTATCTGAGAATGATTGGAAATGCTTCTGTGAAGAATGGGGTAGTATTGAGACCAAAGGAATATCAGCAACAATTGATCATGTTAATGATTCAGAGAATGTATTGACTGGATCCAGTGAGGAGATGCTAGTATGCAAGGATCAGTTGAGCACAGCAGATAAAATGAATTTTGAAAATGGGACTGGACAAATTTTAATTAAGACATGTCCTGAGGTTTGTGAGAGTTGCATCGGAGAAAGAAAGAGCTGTGAGCTAATGCAGAAGCTTAACTATTGCAATGAGGACATATGTGTAATTCTTGTTCGTGGTAAGGAGGTACCTAGATCAATATTGGAGGCTTCAAAGGGATTCGTTGAAACAGATCGGCGAGTTTCCAAGCGTTCCCGCAAGACTAAAAATGGGAGTTCAATTAGTCTAAAAGTTTCTGCTTCAACATCTTTATATCAGCTGAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAGGAAAACCAGATACTACATAAAGGTGATAGGATAATTGATAGCGATAATGAATTTGCTACCCTCGCAGATGTGAACATATTTGCTGGAGATCAGGTTATAGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGATGAGCTTTGCGATGATAAAATGGATCTGCAGCATACCGAGGAAGGGTTCCGAGGAACACTTCTCACAGCAAATGTTTCATCCCAGTTGCAGGGGTATTGA 3258 0.4076 MSRPTTRSKNKRQKQGDDGNGTGEIWRKIHNTGVVTEDDMNQLYMIWKPVCSGCRVNNKDNPNCLCALVPPPNGARKSGLWQKMSDIVESLGHDPTKDLRASADSPAGLTNLGATCYANSILQCLYMNKSFREGMFSVERDVLHQQPVLDQLARLFVQLHISKMAFIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVPKARTIVQDLFRGSVSHVTTCSKCGRDSEASSKMEDFYELELNVKGLKSLDGSLDEYLTVEELNGDNQYFCESCKTRVDATRSIKLCTLPKVLNFQLKRYVFLPKTTTKKKITSAFSFPAELDMRHRMSELSQFNLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDDEHVTNLGFHPFGEESSSSTTKSIKTDAIHFDNSEAMVADSNGNGLSATHSQSSKVETFLSSDAYMLMYHLKHTKSVGKSGGVICGVNHKEREGVVVAVQNGVPLPSHIYDEIQSFNTSYDDACQQYNNRKELQLSRISERRQEVRSVLAEAPVQSLEQPFYWISSEWLRQWADNIIPIPLDNTSVQCSHGKVPVSNVTSMKRLSAKAWDMLFSKYGGGPALSHDNHCRDCLIHGAMTVVSADTYRDRRESMKSLARDILDGNCLDGKYYISRPWLQQWWKRKVLDAPSEADAGPTAAISCPHGQLMPEQAPGAKRVLIPESFWLFLYEDAVSVTPDDPLGGPTFSSDSEECSQCSNELSEVACLEDSLRLVKQKQRQNHEKLFQAKSMPLSMHSKYFLVPSSWISKWRNYISPTLKNSDKPETLDGVIDSMLCEKHSQLIERPPELVFRRGAIIQRESSVSCLTIVSENDWKCFCEEWGSIETKGISATIDHVNDSENVLTGSSEEMLVCKDQLSTADKMNFENGTGQILIKTCPEVCESCIGERKSCELMQKLNYCNEDICVILVRGKEVPRSILEASKGFVETDRRVSKRSRKTKNGSSISLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIIDSDNEFATLADVNIFAGDQVIVRDSEIHENRDIADELCDDKMDLQHTEEGFRGTLLTANVSSQLQGY 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00671 1085 ProSiteProfiles DUSP domain profile. 514 606 IPR006615 GO:0004843
Gma06g00671 1085 MobiDBLite consensus disorder prediction 1 25 - -
Gma06g00671 1085 SUPERFAMILY DUSP-like 516 606 IPR035927 -
Gma06g00671 1085 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Gma06g00671 1085 ProSiteProfiles Ubiquitin domain profile. 974 1040 IPR000626 GO:0005515
Gma06g00671 1085 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 450 IPR028889 -
Gma06g00671 1085 Gene3D - 972 1043 - -
Gma06g00671 1085 SUPERFAMILY Ubiquitin-like 974 1040 IPR029071 -
Gma06g00671 1085 Pfam Ubiquitin carboxyl-terminal hydrolase 108 447 IPR001394 GO:0004843|GO:0016579
Gma06g00671 1085 ProSiteProfiles DUSP domain profile. 621 728 IPR006615 GO:0004843
Gma06g00671 1085 CDD Ubl_USP48 973 1074 IPR044743 GO:0004197|GO:0004843|GO:0016579
Gma06g00671 1085 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1053 - -
Gma06g00671 1085 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 108 123 IPR018200 GO:0004843|GO:0006511
Gma06g00671 1085 SMART dusp 532 603 IPR006615 GO:0004843
Gma06g00671 1085 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1053 - -
Gma06g00671 1085 SUPERFAMILY Cysteine proteinases 106 450 IPR038765 -
Gma06g00671 1085 CDD Peptidase_C19L 108 447 IPR033841 GO:0004843
Gma06g00671 1085 Gene3D - 505 607 IPR035927 -
Gma06g00671 1085 Gene3D Cysteine proteinases 90 450 - -
Gma06g00671 1085 MobiDBLite consensus disorder prediction 10 24 - -
Gma06g00671 1085 Gene3D - 745 866 IPR035927 -
Gma06g00671 1085 ProSiteProfiles DUSP domain profile. 749 869 IPR006615 GO:0004843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00671 Gma-Chr6 6092899 6103663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00671 105 385 Miscellaneous Gene Families AT4G31670 29.043 1.61e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00671 - K11858 gmx:100815770 2186.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00671 06 6092899 6103663 Gma06g00671 06 6092899 6103663 ECH
Gma04g00677 04 6276503 6291421 Gma06g00671 06 6092899 6103663 GST
Gma14g01192 14 19036402 19045426 Gma06g00671 06 6092899 6103663 PCT
Gma06g00671 06 6092899 6103663 Gma14g01192 14 19036402 19045426 PCT