Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00551 ATGGCGTACAAAGTGGACCATGAATACGACTACCTCTTCAAGGTCGTATTGATTGGGGACTCCGGGGTTGGAAAATCTAACATACTTTCCAGATTTACGAGAAATGAGTTCTGCTTGGAATCTAAGTCTACTATTGGGGTTGAATTCGCAACCAGAACATTGCAGGTGGAGGGGAAGACTGTGAAGGCACAAATATGGGACACTGCAGGGCAAGAGAGGTACAGAGCTATCACCAGTGCCTACTATAGAGGAGCTGTTGGAGCCTTGTTGGTGTATGACATAACCAAGAGGCAAACATTTGACAATGTGCAGAGGTGGCTTCGCGAACTAAGGGACCATGCGGACTCCAACATTGTTATCATGATGGCTGGAAACAAATCTGACCTGAATCATCTGAGAGCAGTGTCTACTGAAGATGCTCAAAGTTTGGCTGAGAGGGAAGGTTTGTCCTTTCTAGAGACTTCAGCATTGGAGGCATACAATGTTGAGAAGGCATTCCAAACCATTTTGTTTGATATATATCACATTATAAGTAAAAAGGCACTGGCAGCACAAGAGGCTAATTCCTCTACTGGCCTTCCCCAAGGAACTACCATAAATGTCTCGAATATGTCCAGTAATGCTGGCAATAGAAGTTGTTGCTCTAACTAA 651 0.4424 MAYKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKKALAAQEANSSTGLPQGTTINVSNMSSNAGNRSCCSN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00551 216 ProSiteProfiles small GTPase Rab1 family profile. 8 214 - -
Gma14g00551 216 Pfam Ras family 14 173 IPR001806 GO:0003924|GO:0005525
Gma14g00551 216 MobiDBLite consensus disorder prediction 190 216 - -
Gma14g00551 216 ProSiteProfiles small GTPase Ras family profile. 1 204 IPR001806 GO:0003924|GO:0005525
Gma14g00551 216 Gene3D - 5 214 IPR027417 -
Gma14g00551 216 SMART rab_sub_5 13 176 - -
Gma14g00551 216 PANTHER - 1 216 - -
Gma14g00551 216 SMART ran_sub_2 18 209 - -
Gma14g00551 216 PANTHER RAS-RELATED PROTEIN RAB11C-LIKE 1 216 - -
Gma14g00551 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 178 IPR027417 -
Gma14g00551 216 CDD Rab11_like 10 174 - -
Gma14g00551 216 TIGRFAM small_GTP: small GTP-binding protein domain 11 169 IPR005225 GO:0005525
Gma14g00551 216 PRINTS Transforming protein P21 ras signature 13 34 - -
Gma14g00551 216 PRINTS Transforming protein P21 ras signature 36 52 - -
Gma14g00551 216 PRINTS Transforming protein P21 ras signature 54 76 - -
Gma14g00551 216 PRINTS Transforming protein P21 ras signature 116 129 - -
Gma14g00551 216 PRINTS Transforming protein P21 ras signature 151 173 - -
Gma14g00551 216 ProSiteProfiles small GTPase Rho family profile. 6 174 - -
Gma14g00551 216 SMART ras_sub_4 10 176 - -
Gma14g00551 216 SMART rho_sub_3 15 172 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00551 Gma-Chr14 5306889 5308883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00551 K07904 - gmx:100799595 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02380 02 49855003 49857777 Gma14g00551 14 5306889 5308883 ECH
Gma14g00551 14 5306889 5308883 Gma14g00551 14 5306889 5308883 ECH
Gma14g00551 14 5306889 5308883 Gma02g02380 02 49855003 49857777 GST
Gma18g00317 18 2615776 2617310 Gma14g00551 14 5306889 5308883 PCT
Gma14g00551 14 5306889 5308883 Gma18g00317 18 2615776 2617310 PCT