Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00494 ATGGCGGCCGCGAATGCTCCGATCACCATGAAAGAAGCCCTAACTTTGCCGAGCATTGGCATCAATTCGCAATTCATCACGTTTACGCACGTGACGATGGAATCGGATAAGTATATATGTGTTCGTGAAACCGCTCCACAGAATAGCGTGGTTATCATTGATATGAACATGCCAAATCAACCTTTGAGGAGGCCTATCACCGCAGATTCCGCTCTTATGAATCCGAATTCTAGAATTCTTGCTTTGAAAGCCCAACTGCAAGGAACTACTCAAGATCACCTGCAAATATTTAACATTGAGATGAAAGCAAAGATGAAATCATATCAGATGCCTGAGCAGGTAGTCTTTTGGAAGTGGATTAGCCCCAAGATGTTGGGTCTCGTAACACAGACCTCTGTATACCACTGGTCAATTGAAGGTGACTCTGAACCTGTTAAGATGTTTGAGAGAACAGCAAATTTGGCAAACAACCAGATAATTAATTATCGATGTGACCCTACAGAAAAATGGTTGGTTTTGATTGGCATTGCTCCTGGTGCACCTGAGAGGACACAATTGGTAAAGGGAAACATGCAACTTTTCTCAGTGGATCAACAACGTAGTCAGGCTCTTGAAGCTCATGCTGCATCATTTGCCCAATTTAAAGTTCCTGGGAATGAAAATCCTTCTGTTTTGATTTCTTTTGCCTCGAAGACACTTAATGCTGGTCAAGTTATATCCAAGTTGCATGTTATTGAACTGGGAGCACAACCAGGGAGGCCATCATTCACAAAGAAGCAAGCTGATCTTTTCTTCCCCCCAGATTTTGCTGATGATTTTCCAGTTGCCATGCAGATATCCCACAAATACAATTTGATTTATGTGATTACGAAACTTGGCCTACTATTTGTCTATGATTTGGAGACAGCTACTGCTGTATATAGGAACAGAATCAGTCCAGATCCTATATTTTTGACCTCAGAAGCTACATCTGTGGGAGGCTTTTATGCCATCAACAGGAGAGGCCAGGTTTTATTGGCTACTGTTAATGAACAAACCATTGTGAATTTTGTCAGTGGCCAACTAAACAATTTGGAGCTAGCAGTTAGTCTTGCCAAAAGAGGAAATCTTCCTGGTGCTGAAAAGCTGGTAGTGGAACGTTTTCATGAACTGTTTGCCCAAACAAAATATAAGGAAGCTGCAGAACTTGCAGCTGAATCTCCACAAGGAATCCTTCGAACTCCTGACACAGTTGCCAAATTTCAGAGTGTTCCTGTGCAAGCTGGGCAAACTCCTCCTCTGTTGCAGTATTTTGGAACACTTTTAACAAGGGGAAAGCTGAATGCCTTTGAATCATTAGAATTATCACGGTTGGTTGTGAACCAGAACAAGAAAAATCTGTTGGAAAATTGGTTGGCAGAGGACAAGCTTGAATGCAGTGAGGAGCTAGGAGATCTCGTTAAGACTGTGGACAATGATCTTGCTTTAAAAATATATATCAAAGCCAGAGCTACTCCAAAAGTTGTTGCTGCGTTTGCTGAGAGGAGAGAGTTTGACAAAATTCTGATTTACTCTAAACAGGTTGGGTACACACCTGACTACCTCTTCCTTCTGCAAACAATTCTCCGGACAGATCCTCAGGGCGCTGTTAATTTTGCATTAATGATGTCTCAAATGGAGGGAGGTAGCCCAGTTGATTACAACACAATAACTGATCTCTTTCTTCAGAGAAATCTGATTCGAGAGGCAACAGCTTTTCTCCTGGATGTTTTAAAGCCGAATCTACCAGAACATGGGTTCCTTCAGACAAAGGTGTTGGAGATAAATCTGGTGACTTTCCCCAATGTTGCTGATGCAATATTGGCTAATGGCATGTTCAGCCATTATGACCGTCCTCGTATTGCCCAACTTTGTGAAAAAGCTGGCCTTTATGTGCGAGCTTTGCAACATTACACAGAATTACCAGACATCAAACGCGTGATTGTTAATACACATGCAATTGAACCTCAGTCACTCGTAGAGTTTTTTGGTACACTGTCAAAAGAATGGGCATTAGAATGCATGAAAGACTTACTGCTGGCCAATCTTAGGGGCAACCTACAGATCATTGTGCAGGTTGCTAAAGAATATTGTGAGCAATTGGGCGTTGATGCCTGCATAAAACTTTTTGAGCAATTTAGGTCATATGAGGGACTGTACTTTTTCCTTGGATCATACTTGAGCTCCAGTGAGGATCCTGACATTCACTTTAAGTACATTGAGGCAGCAGCAAAGACTGGTCAAATCAAGGAGGTTGAGCGTGTGACAAGAGAATCAAATTTCTATGATGCTGAGAAAACCAAAAACTTTCTGATGGAGGCTAAACTTCCAGATGCACGGCCTTTGATTAATGTTTGTGATCGTTTTGGATTTGTTCCAGATCTAACACACTATCTATACACAAACAACATGGTTCGCTACATTGAAGGCTATGTTCAGAAGGTGAACCCAGGGAATGCACCTTTAGTTGTTGGGCAGCTGCTAGATGATGAATGCGCAGAAGATTTTATCAAAGGCTTGATCCTTTCTGTTCGTTCATTACTGCCAGTGGAGCCCCTTGTGGAGGAATGTGAGAAGAGGAATCGACTTCGTATGCTCACACAGTTCTTGGAACACCTTGTAAGTGAGGGAAGCCAGGATGTACATGTTCACAATGCACTGGGTAAAATTATCATTGATAGCAACAACAACCCAGAACATTTCCTCACAACCAACCCATACTATGATTCTCGAGTTGTGGGCAAGTATTGTGAGAAACGGGATCCCACCTTAGCAGTTGTAGCTTATCGGCGAGGACAATGTGACGATGAACTTATCAATGTCACCAACAAAAATTCTTTGTTCAAACTGCAAGCAAGATATGTTGTTGAGAGAATGGATGGTGATTTGTGGGCTAAAGTTCTTGATCCTGATAATGAATATAGAAGGCAACTTATTGATCAGGTTGTATCTACTGCTTTGCCTGAAAGCTCAAGCCCTGAGCAAGTTTCTGCAGCTGTTAAGGCTTTCATGACAGCCGATCTGCCCCATGAATTGATTGAACTTCTTGAGAAGATTGTGCTTCAGAATTCTGCATTCAGTGGAAACTTTAATTTGCAGAATCTTCTTATTTTGACAGCAATAAAGGCTGATCCATCCAGAGTTATGGATTATGTTAATAGATTGGATAATTTTGATGGGCCCGCAGTTGGAGGAATGGCTGTAGAAGCTCAGTTATATGAGGAAGCATTTGCCATTTTTAAGAAGTTCAACTTGAATGTTCAAGCAGTCAACGTGTTGCTTGATAAGATTCATAGCATTGATAGAGCTGTTGAGTTTGCTTTCCGAGTTGAAGAAGATGCTGTTTGGAGTCAGGTGGCCAAGGCTCAACTCAGGGATGGGCTAGTAAGTGATGCAATTGAGTCATTTATACGAGCTGATGATGCTACACAATTTTTAGATGTTATCCGTGCTGCTGAAGATGGCAATGTTTACCATGACTTGGTGAAATACTTGCTAATGGTAAGAGGGAAAGCAAAAGAACCCAAGGTCGACAGTGAGCTCATTTATGCATATGCAAAAATAGATAGGCTGAGTGACATTGAGGAGTTCATTCTTATGCCTAATGTTGCTAATCTTCAAAATGTTGGTGACCGGTTGTACGATGAAGCATTATATGAAGCTGCAAAAATCATATTTGCTTTTATATCTAACTGGGCCAAGTTGGCTATCACACTGGTCAAATTACAACAGTTTCAAGGTGCTGTTGATGCAGCAAGGAAAGCCAACAGCTCAAAGACATGGAAGGAAGTTTGCTTTGCTTGTGTTGATGCAGAGGAGTTTCGTTTGGCCCAAATTTGTGGACTAAACATTATTATTCAGGTGGATGACTTGGAAGAAGTCAGTGAATATTACCAAAACAGAGGTTGCTTCAATGAGCTCATATCTCTCATGGAGAGTGGTTTAGGGTTAGAACGGGCACATATGGGCATCTTTACTGAGTTAGGAGTTCTGTACGCTAGATACCGCCCTGAGAAGCTTATGGAGCATATCAAACTATTCTCAACCCGCCTCAATATTCCTAAACTCATAAGAGCTTGTGATGAACAACAGCATTGGAAAGAATTGACCTATTTGTATATACAATATGATGAGTTTGATAATGCTGCAACTACCATCATGAACCATTCACCTGAAGCATGGGATCACATGCAATTCAAAGATGTTGTTGTTAAAGTTGCCAATGTGGAGTTGTACTACAAGGCTGTTCACTTCTACTTGGAAGAGCATCCAGATCTTATCAATGATGTTCTGAACGTCCTTGCACTTCGTGTGGACCATGCACGTGTTGTTGACATCATGCGGAAGGCTGGTCACCTCCGTCTTGTGAAACCGTATATGATTGCAGTTCAAAGCAACAATGTATCTGCTGTTAATGAAGCGTTGAATGAGATATATGTCGAGGAGGAAGATTATGATAGATTGCGCGAGTCAATTGATTTGCACGATAACTTTGATCAAATAGGCCTTGCTCAAAAGATTGAAAAGCATGAGCTTCTTGAGATGAGACGTGTTGCTGCTTATATTTACAAGAAGGCAGGTAGGTGGAAGCAGTCTATTGCTTTGTCAAAGAAGGATAACCTTTACAAAGATGCCATGGAGACAGCCTCCCAATCCGGGGAGCGTGAACTTGCTGAGGAGTTGCTTGTTTATTTCATTGATCAGGGAAAGAAGGAATGCTTTGCCTCATGTCTATTTGTTTGCTATGATCTCATACGGGCAGACATTGTTCTTGAACTAGCTTGGATGCACAATATGATTGACTTTGCCTTCCCATATCTATTGCAGTTTATTCGTGAGTACACTGGCAAAGTCGATGAACTAGTGAAGGACAAAATTGAAGCACAAAATGAAGTGAAGGCTAAAGAGCAAGAAGAAAAGGATGTAGTTGCACAACAGAACATGTATGCTCAATTGTTGCCTCTTGCTTTGCCTGCACCACCAATGCCTGGAATGGGAGGCTTTGCTCCTCCCCCTCCAATGGGTGGACTGGGGATGCCCCCAATGCCTCCTTATGGTATGCCACCCATGGGCAGCAGTTTTTGA 5103 0.4188 MAAANAPITMKEALTLPSIGINSQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQPLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWISPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPGAPERTQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSVLISFASKTLNAGQVISKLHVIELGAQPGRPSFTKKQADLFFPPDFADDFPVAMQISHKYNLIYVITKLGLLFVYDLETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLELAVSLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGSPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAIEPQSLVEFFGTLSKEWALECMKDLLLANLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFRSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMVRYIEGYVQKVNPGNAPLVVGQLLDDECAEDFIKGLILSVRSLLPVEPLVEECEKRNRLRMLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWAKVLDPDNEYRRQLIDQVVSTALPESSSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGGMAVEAQLYEEAFAIFKKFNLNVQAVNVLLDKIHSIDRAVEFAFRVEEDAVWSQVAKAQLRDGLVSDAIESFIRADDATQFLDVIRAAEDGNVYHDLVKYLLMVRGKAKEPKVDSELIYAYAKIDRLSDIEEFILMPNVANLQNVGDRLYDEALYEAAKIIFAFISNWAKLAITLVKLQQFQGAVDAARKANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLEEHPDLINDVLNVLALRVDHARVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGERELAEELLVYFIDQGKKECFASCLFVCYDLIRADIVLELAWMHNMIDFAFPYLLQFIREYTGKVDELVKDKIEAQNEVKAKEQEEKDVVAQQNMYAQLLPLALPAPPMPGMGGFAPPPPMGGLGMPPMPPYGMPPMGSSF 1700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00494 1700 Coils Coil 1477 1497 - -
Gma14g00494 1700 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 847 986 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 SUPERFAMILY ARM repeat 1196 1531 IPR016024 -
Gma14g00494 1700 Gene3D - 1542 1638 - -
Gma14g00494 1700 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1288 1434 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 SMART CLH_2 1288 1434 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 SMART CLH_2 700 842 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 SMART CLH_2 551 693 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 SMART CLH_2 847 986 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 SMART CLH_2 1142 1283 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 SMART CLH_2 1437 1596 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 SMART CLH_2 993 1138 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 PANTHER CLATHRIN HEAVY CHAIN 1 1699 - -
Gma14g00494 1700 Pfam Clathrin, heavy-chain linker 344 367 IPR015348 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Gma14g00494 1700 Pfam Region in Clathrin and VPS 555 690 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 Pfam Region in Clathrin and VPS 1292 1431 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 Pfam Region in Clathrin and VPS 1440 1579 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 Pfam Region in Clathrin and VPS 850 983 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 Pfam Region in Clathrin and VPS 993 1130 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 Pfam Region in Clathrin and VPS 701 840 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 Pfam Region in Clathrin and VPS 1147 1281 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 700 842 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 Gene3D - 1 377 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Gma14g00494 1700 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1142 1283 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 SUPERFAMILY ARM repeat 345 500 IPR016024 -
Gma14g00494 1700 SUPERFAMILY ARM repeat 1053 1195 IPR016024 -
Gma14g00494 1700 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 993 1138 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 Coils Coil 1617 1651 - -
Gma14g00494 1700 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1437 1580 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 SUPERFAMILY Clathrin heavy-chain terminal domain 5 343 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Gma14g00494 1700 PIRSF CHC 3 1685 IPR016341 GO:0016192|GO:0032051|GO:0071439
Gma14g00494 1700 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 551 697 IPR000547 GO:0006886|GO:0016192
Gma14g00494 1700 Pfam Clathrin propeller repeat 154 197 IPR022365 -
Gma14g00494 1700 Pfam Clathrin propeller repeat 20 56 IPR022365 -
Gma14g00494 1700 PANTHER CLATHRIN HEAVY CHAIN RELATED 1 1699 - -
Gma14g00494 1700 Pfam Clathrin-H-link 369 434 - -
Gma14g00494 1700 Gene3D Tetratricopeptide repeat domain 1052 1196 IPR011990 GO:0005515
Gma14g00494 1700 Gene3D Tetratricopeptide repeat domain 1197 1536 IPR011990 GO:0005515
Gma14g00494 1700 SUPERFAMILY ARM repeat 901 1069 IPR016024 -
Gma14g00494 1700 SUPERFAMILY ARM repeat 457 793 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00494 Gma-Chr14 4660999 4675344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00494 K04646 - gmx:100786715 3239.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00494 14 4660999 4675344 Gma14g00494 14 4660999 4675344 ECH
Gma14g00494 14 4660999 4675344 Gma02g02433 02 50453060 50466831 GST
Gma18g00242 18 1959793 1971628 Gma14g00494 14 4660999 4675344 PCT
Gma14g00494 14 4660999 4675344 Gma18g00242 18 1959793 1971628 PCT