Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03050 ATGGGTGCCGTTAGGTCCATAACGGTGTTGGTACTAGTGTTATTTATGGCCATGAGCTCCGGCGTGCGCTCGTGTCCGCCGTcggacagggcggcgctgctggcattcaaggcggcgctccacgaaccctacctgggaatcttcaactcgtggaccggcgccgactgctgccacaagtggtacggcgtgagctgcgaccaggagacccgccgcgtcgccgacatcaacctccgcggcgagtcggaggagccgatcttcgagcgcgcccaccgcaccggctacatgaccggctacatctcgccggcgatctgcaagctcgcgcgcctctccagcatcaccatcgccgactggaagggaatctccggcgAGATCCCGCGCTGCATCACGACCCTCCCGTTCCTCCGCATCGTCGACCTCATCGGAAACCGCCTCTCCGGCTCCATTCCCGCCGACATCGGCAGACTCCATCGCCTCACGGTGCTCAACGTCGCCGACAATCTCATCTCCGGAACAATCCCAACCTCGTTGGCGAACCTCAGCAGTCTCATGCACTTGGATCTCCGAAACAACCTCTTCTCCGGGCCCATTCCAAGAAACTTCGGTTCTCTCAGCATGCTGAGCCGGGCCTTGCTCAGCGGAAACAGGCTAAGTGGGGCCATCCCGAGCTCAGTTTCTCAGATTTACCGTCTGGCGGATCTGGATCTGTCTCGTAACCAGATTTCTGGGCCCATTCCGGAGTCGCTGGGTAAAATGGCGGTTTTATCGACACTAAACTTGGACATGAATAAACTCTCTGGGCCCATTCCGGTGAGTCTGTTTAGTTCCGGAATCAGTGACTTAAACCTGAGCCGGAACGCCTTGGAGGGAAACATACCGGACGCGTTCGGCGTGAGGTCTTATTTCACTGCTCTGGATTTGTCGTATAATAACCTAAAAGGGGCCATACCTAAGTCCATATCCTCTGCTTCCTATATTGGGCACTTGGATTTGAGTCACAACCATCTCTGTGGCAAGATTCCCCTTGGCTCTCCTTTTGATCATCTCGAAGCCTCCTCCTTTGTCTACAACGATTGTCTCTGCGGGAAGCCACTCAAACCTTGCTACTAG 1107 0.3975 MGAVRSITVLVLVLFMAMSSGVRSCPPSDRAALLAFKAALHEPYLGIFNSWTGADCCHKWYGVSCDQETRRVADINLRGESEEPIFERAHRTGYMTGYISPAICKLARLSSITIADWKGISGEIPRCITTLPFLRIVDLIGNRLSGSIPADIGRLHRLTVLNVADNLISGTIPTSLANLSSLMHLDLRNNLFSGPIPRNFGSLSMLSRALLSGNRLSGAIPSSVSQIYRLADLDLSRNQISGPIPESLGKMAVLSTLNLDMNKLSGPIPVSLFSSGISDLNLSRNALEGNIPDAFGVRSYFTALDLSYNNLKGAIPKSISSASYIGHLDLSHNHLCGKIPLGSPFDHLEASSFVYNDCLCGKPLKPCY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03050 368 SUPERFAMILY L domain-like 24 367 - -
Gma13g03050 368 Gene3D Ribonuclease Inhibitor 198 274 IPR032675 -
Gma13g03050 368 Pfam Leucine rich repeat 278 335 IPR001611 GO:0005515
Gma13g03050 368 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Gma13g03050 368 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 5 367 - -
Gma13g03050 368 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Gma13g03050 368 Gene3D Ribonuclease Inhibitor 27 197 IPR032675 -
Gma13g03050 368 Gene3D Ribonuclease Inhibitor 277 367 IPR032675 -
Gma13g03050 368 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03050 Gma-Chr13 44868988 44871281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03050 68 367 Receptor kinase-like Gene Family AT5G46330 36.202 3.06e-48 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03050 - - gmx:100804739 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03050 13 44868988 44871281 Gma13g03050 13 44868988 44871281 ECH
Gma13g03050 13 44868988 44871281 Gma12g00494 12 4111046 4112299 PCT
Gma13g03050 13 44868988 44871281 Gma11g01192 11 10165545 10166972 PCT
Gma12g00494 12 4111046 4112299 Gma13g03050 13 44868988 44871281 PCT
Gma11g01192 11 10165545 10166972 Gma13g03050 13 44868988 44871281 PCT