Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00494 ATGGGTGGTGCTAGTGTAAATTTCTCAATGGCACTAGTAGTAATGACCCTAGTTGGTCTAACACCCTTATCAGTTACCTCATGCCCTTCCTCCGAATGGGCAGCACTAATGTCCTTCAAAGAAGCCCTAAAAGAGCCCTACCGTGGGTTTTTCCATTCATGGAGAGGCACCAATTGCTGCTACCGCTGGCACGGCATCACGTGCGACCCCACCACGCGCCGCGTAGCGGATATCACCCTCCGTGGCGGTGACATGATGACCGGCCACATCTCCCCCTCCATATGCAACCTCACGCAGCTCTCCAGCATCACAATCTCCGACTGGAAGGGCATTTCGGGAAACATCCCTCCCTGCATCACAAAACTCCCTCTCCTCCAAATCCTTGACCTCTCCGGCAACCTCATCCACGGCCAAATCCCCTCCGACATAGGGCGCCTCACGCAACTCACCATGCTCAACCTCGCAGACAATCACATCTCGGGAAAAATCCCGAACTCCCTCGTGCACCTCTCCAACCTCATGCAATTGGACCTTCGCAACAACGCCATCCAAGGCCCAATTCCAATGGACTTGGGGCGGCTCAAAAAACTCAACCGGGCCTTATTAAGTCATAATCTCATAACGGGCCGAATTCCAAGGTCAATTTCAGAAATCTACGGGCTGGCGGACCTGGACCTCTCGCTGAACCGGTTGTCCGGTTCGATTCCGGCTTGGTTGGGCCGAATGGCGGTTCTGGACTCGCTGAACCTGAAGTACAACAACTTAACGGGGAATATTCCGTGGACGGTGTTGGGGTCGAGAATGAGCCACGTGGATCTGAGTCGAAACGCGTTGAGTGGGCGCATACCGAACTCGTTCGGAGAGGACTCGTATTTCATAAGCCTTGATTTGTCGTATAACAATTTGAGGGGTTCGGTTCCTAAGTCTATGGCGTTGGTCAATTACATTGGCTACTTGGATTTGAGTCATAATAACTGTCTCTGTGGGCGCATGCCACGTGGCGTGGCCTTCAACCACCTTCAACCGCTAAAACCATGCTCTCGTGCCTCTGGTCGCATGCATGCGTGA 1068 0.5318 MGGASVNFSMALVVMTLVGLTPLSVTSCPSSEWAALMSFKEALKEPYRGFFHSWRGTNCCYRWHGITCDPTTRRVADITLRGGDMMTGHISPSICNLTQLSSITISDWKGISGNIPPCITKLPLLQILDLSGNLIHGQIPSDIGRLTQLTMLNLADNHISGKIPNSLVHLSNLMQLDLRNNAIQGPIPMDLGRLKKLNRALLSHNLITGRIPRSISEIYGLADLDLSLNRLSGSIPAWLGRMAVLDSLNLKYNNLTGNIPWTVLGSRMSHVDLSRNALSGRIPNSFGEDSYFISLDLSYNNLRGSVPKSMALVNYIGYLDLSHNNCLCGRMPRGVAFNHLQPLKPCSRASGRMHA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00494 355 Gene3D Ribonuclease Inhibitor 267 335 IPR032675 -
Gma12g00494 355 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 355 - -
Gma12g00494 355 SUPERFAMILY L domain-like 27 329 - -
Gma12g00494 355 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Gma12g00494 355 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Gma12g00494 355 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Gma12g00494 355 Gene3D Ribonuclease Inhibitor 189 265 IPR032675 -
Gma12g00494 355 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 2 355 IPR045273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00494 Gma-Chr12 4111046 4112299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00494 86 354 Receptor kinase-like Gene Family AT5G46330 36.806 2.22e-42 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00494 - - gmx:100778852 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00494 12 4111046 4112299 Gma12g00494 12 4111046 4112299 ECH
Gma11g01192 11 10165545 10166972 Gma12g00494 12 4111046 4112299 ECH
Gma12g00494 12 4111046 4112299 Gma11g01192 11 10165545 10166972 GST
Gma13g03050 13 44868988 44871281 Gma12g00494 12 4111046 4112299 PCT
Gma12g00494 12 4111046 4112299 Gma13g03050 13 44868988 44871281 PCT