Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01192 ATGGGTAGAGTTTGGTTCACGGCGCCGTTGAcggcgctgttactgctcgcattttcctccgcggttagttcgtgtccacagtcggacctggcggcgctgttggccttcaaatccgctctccgggagtccaacgacggcatattcaacacgtggaccggcaccgactgctgccacaactggtacggcatctcctgcgaccgcaacacccaccgcgtcgccgagatcagcctccgcgccggtcccgtctacaccaccttcgagaagcccttccgtcctggctacatgtccggttccatctcgccggagatttgcaagctcactcacctctccagcatcatcatcaccgattggcagggaatctccggcgAGATCCCGCGCTGCATCACCTCCCTCTTCTTCCTCCGCATCATCGACCTCACCGGAAACCGCATCGCCGGCACTCTCCCCTCCAACATCGGAAGACTTCGCCATCTGACTCTTCTCAGCGCCGCCGATAACGTCATCGCCGGCATAATCCCGCCGTCGCTAACCAACGTGACCGGTTTGATGCATCTTGACCTCCGTAACAACCGGATCTTCGGGCCCATCCCACGAAGCCTGGGCCGGCTTCAAATGCTGAGCCGCGTCCTTTTAAGCGGGAACCATATTAGTGGGCCCATCCCGCGTTCATTCTGTCATATATATCGTCTGGTGGATCTGGACCTCTCTAATAACCGTTTATCTGGGTCCATCCCTGAAGCTTTGGGCCGAATGAAGGTACTATCGACGTTGAAGTTGGACTCTAACAGGCTTTCGGGAAGTATACCGGCGAGCCTTTTGGGCTCGGGTATCAGTGAGTTGAACTTGAGCCACAATTATTTGGAGGGAAATATACCTGACTCGTTTGGAGGTAGCTCTTATTTCACGTTACTGGACTTATCGTATAATAACCTCAAGGGCCCAATACCCAAATCCATGTCTTCCTCTTCCTACGTTGGGTTTGTGGACTTTAGCCACAACCACCTCTGCGGCCCAATTCCCAGCAGCTACAGTGATGCCGATGCGTCGTCGTTTGATTACAACGATTGCCTTTGTGGAAAGCCACTCAAAGCTTGCTAA 1098 0.3625 MGRVWFTAPLTALLLLAFSSAVSSCPQSDLAALLAFKSALRESNDGIFNTWTGTDCCHNWYGISCDRNTHRVAEISLRAGPVYTTFEKPFRPGYMSGSISPEICKLTHLSSIIITDWQGISGEIPRCITSLFFLRIIDLTGNRIAGTLPSNIGRLRHLTLLSAADNVIAGIIPPSLTNVTGLMHLDLRNNRIFGPIPRSLGRLQMLSRVLLSGNHISGPIPRSFCHIYRLVDLDLSNNRLSGSIPEALGRMKVLSTLKLDSNRLSGSIPASLLGSGISELNLSHNYLEGNIPDSFGGSSYFTLLDLSYNNLKGPIPKSMSSSSYVGFVDFSHNHLCGPIPSSYSDADASSFDYNDCLCGKPLKAC 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01192 365 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Gma11g01192 365 SUPERFAMILY L domain-like 24 340 - -
Gma11g01192 365 Gene3D Ribonuclease Inhibitor 93 365 IPR032675 -
Gma11g01192 365 Gene3D Ribonuclease Inhibitor 21 91 IPR032675 -
Gma11g01192 365 Pfam Leucine Rich Repeat 182 202 IPR001611 GO:0005515
Gma11g01192 365 Pfam Leucine Rich Repeat 279 296 IPR001611 GO:0005515
Gma11g01192 365 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 365 - -
Gma11g01192 365 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 3 365 - -
Gma11g01192 365 Pfam Leucine rich repeat 206 264 IPR001611 GO:0005515
Gma11g01192 365 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01192 Gma-Chr11 10165545 10166972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01192 110 365 Receptor kinase-like Gene Family AT4G08850 36.842 2.16e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01192 - - gmx:100791273 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01192 11 10165545 10166972 Gma11g01192 11 10165545 10166972 ECH
Gma11g01192 11 10165545 10166972 Gma12g00494 12 4111046 4112299 ECH
Gma12g00494 12 4111046 4112299 Gma11g01192 11 10165545 10166972 GST
Gma13g03050 13 44868988 44871281 Gma11g01192 11 10165545 10166972 PCT
Gma11g01192 11 10165545 10166972 Gma13g03050 13 44868988 44871281 PCT