Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02927 ATGGGAAGCAGAATGAGCCTTTTGATGTTGTTCCTTGTTCTTTGCCATGGCGTGGCATTAACAATGGGTTTGTGGAGGACAGAGGTGGAAGAGAGAGAAGAGGGACATCCAAGGCCAGACAAATTGTTCATGATGCTGAAATCCAAGCGCGTGGCCCAAACCGACGCTGGGGAGATGCGAGTGTTGGAAAGCTATGGTGGTAGGATTTTGGAGAGGCGCTTGAACATTGGTTTCATCAACATGGAACCAAGGTCCCTCTTCATTCCTCAGTACATCGACTCCACTTTGATCATATTCCTGCGTTCAGGGGAAGCAAAGTTGGGATTCATATATAAAGACAAACTGGCGGAAAGGCATTTGAAGATGGGAGATGTATATCAAATTCCAGCTGGTTCTGCATTCTATCTAGTGAACATAGAGGAGGCTCAGAAGCTTCACATTATCTGCAGCATTGACCCCTCTGAGAGCTTGGGAATCGATATTTTCCAGTCCTTCTATCTTGGAGGAGGAGCCCATCCAGCCTCAGTACTTTCTGGATTCGAGCCTCAAATCCTTGAAACTGCTTTTAACGCATCAGGAGAAGAGTTGCGAAAAATGTTCACTAGGCAACACGAGGGTCCAATTGTGCATGTGGGGGATTCACATGCCACAAGCATATGGACCAAGTTCCTTCAACTTAAGGAGGAAGACAAACTGCAGCACCTGAGGGAGATGGTGCAACAAGAACAAGAAGAAGAGGAGGAGGAATTTGTTGCTGAAGAAGAGAAACAAACAAGTTGGTCGTGGAGGAAGCTCTTGGAATCTGTATTTGGGGATGAGATCAAGAACACAAGAGAGAAGGTTACAAAAAAATCCCCTCACTCTTGCAACCTCTATGACAGAAAGCCAGATTTCAAAAACAGTTATGGTTGGAGCGTTGCTCTAGACGGCTCTGAGTATTCTCCACTCAAAAGTTCTGGCGTTGGCATTTATCATGTCAATCTCTCAGCGGGATCAATGATGGCACCCCATGTGAATCCAAGGGCAACAGAGTATGGAATAGTGCTAAAAGGATCAGGCAGAATCCAAATAGTGTTTCCAAACGGAAGCAACGCAATGGACGCCCACATCAAAGAAGGGGACGTGTTCTTCATTCCAAGGTACTTTGCCTTCTGCCAAATAGCATCAAGGGGTGAACCACTTGAGTTCTTTGGCTTCACCACCTCGGCTCAAAAGAACAGGCCACAATTTCTGGTTGGTGCCACGTCACTCATGAGGACCATGGTGGGGCCCGAGCTTGCGGCTGCATTTGGTGTGAGCGAGGAGACCATGAATCGCGTGGCTAGGGCACAACATGAAGCTGTGATTCTACCAACTCCATGGGCTGCACATGCACATGATCACAAGGTCAAGGAGGAAGTGGTGGTGGATATTTTTCAAAAGCTTGCAAGGAATGAGATTATGGGCTTTTGA 1452 0.4697 MGSRMSLLMLFLVLCHGVALTMGLWRTEVEEREEGHPRPDKLFMMLKSKRVAQTDAGEMRVLESYGGRILERRLNIGFINMEPRSLFIPQYIDSTLIIFLRSGEAKLGFIYKDKLAERHLKMGDVYQIPAGSAFYLVNIEEAQKLHIICSIDPSESLGIDIFQSFYLGGGAHPASVLSGFEPQILETAFNASGEELRKMFTRQHEGPIVHVGDSHATSIWTKFLQLKEEDKLQHLREMVQQEQEEEEEEFVAEEEKQTSWSWRKLLESVFGDEIKNTREKVTKKSPHSCNLYDRKPDFKNSYGWSVALDGSEYSPLKSSGVGIYHVNLSAGSMMAPHVNPRATEYGIVLKGSGRIQIVFPNGSNAMDAHIKEGDVFFIPRYFAFCQIASRGEPLEFFGFTTSAQKNRPQFLVGATSLMRTMVGPELAAAFGVSEETMNRVARAQHEAVILPTPWAAHAHDHKVKEEVVVDIFQKLARNEIMGF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02927 483 CDD cupin_7S_vicilin-like_C 296 447 - -
Gma13g02927 483 Gene3D Jelly Rolls 30 222 IPR014710 -
Gma13g02927 483 CDD cupin_7S_vicilin-like_N 51 211 - -
Gma13g02927 483 Pfam Cupin 290 437 IPR006045 -
Gma13g02927 483 Pfam Cupin 47 195 IPR006045 -
Gma13g02927 483 SUPERFAMILY RmlC-like cupins 11 447 IPR011051 -
Gma13g02927 483 Gene3D Jelly Rolls 280 453 IPR014710 -
Gma13g02927 483 PANTHER OS03G0336100 PROTEIN 1 460 - -
Gma13g02927 483 PANTHER OS03G0336100 PROTEIN-RELATED 1 460 - -
Gma13g02927 483 SMART Cupin_1_3 43 197 IPR006045 -
Gma13g02927 483 SMART Cupin_1_3 289 438 IPR006045 -
Gma13g02927 483 Coils Coil 224 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02927 Gma-Chr13 43826145 43828271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02927 76 463 Miscellaneous Gene Families AT2G18540 28.571 2.66e-43 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02927 - - gmx:100818796 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02927 13 43826145 43828271 Gma13g02927 13 43826145 43828271 ECH
Gma13g02927 13 43826145 43828271 Gma15g00432 15 3696470 3697705 GST
Gma13g02927 13 43826145 43828271 Gma12g00636 12 5322541 5322918 PCT
Gma13g02927 13 43826145 43828271 Gma11g01349 11 11724764 11728082 PCT
Gma12g00636 12 5322541 5322918 Gma13g02927 13 43826145 43828271 PCT
Gma11g01349 11 11724764 11728082 Gma13g02927 13 43826145 43828271 PCT