Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00636 ATGAACACTAAAATCAAACAAGGGGAGGTGTTTGTTGTGCCGAGATACTTCCCCTTCTGTCAAATAGCATCAAGGGATGGACCCTTAGAGTTCTTTGGGTTCTCCACCTCTGCCAGGAAGAACAAGCCACAGTTTCTGGCTGGTGCTGTGTCCCTTCTCAGGACCATGATGGGGCCTGAGCTTGCGGCGGCGTTTGGGATGAGCGAGGGCACGTTGCGGCGTGCCGTTGATGCTCAGCATGTGGCCGTGATCCTTCCATCAGCATGGGCTGCACCACCAGAAGATGCAGGGAAGATAAAGATGGAAGAAGAGAAGGTGCACATGCTGCCTAAGGCTATTAGAAGCTTTGCCAATGATGTGGTTATGGATGTTTATTAA 378 0.5106 MNTKIKQGEVFVVPRYFPFCQIASRDGPLEFFGFSTSARKNKPQFLAGAVSLLRTMMGPELAAAFGMSEGTLRRAVDAQHVAVILPSAWAAPPEDAGKIKMEEEKVHMLPKAIRSFANDVVMDVY 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00636 125 Pfam Cupin 1 69 IPR006045 -
Gma12g00636 125 SUPERFAMILY RmlC-like cupins 3 87 IPR011051 -
Gma12g00636 125 PANTHER OS03G0336100 PROTEIN 2 95 - -
Gma12g00636 125 PANTHER OS03G0336100 PROTEIN-RELATED 2 95 - -
Gma12g00636 125 Gene3D Jelly Rolls 1 110 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00636 Gma-Chr12 5322541 5322918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00636 4 106 Miscellaneous Gene Families AT4G36700 39.423 1.19e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00636 - - gmx:547942 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00636 12 5322541 5322918 Gma12g00636 12 5322541 5322918 ECH
Gma12g00636 12 5322541 5322918 Gma11g01349 11 11724764 11728082 GST
Gma13g02927 13 43826145 43828271 Gma12g00636 12 5322541 5322918 PCT
Gma15g00432 15 3696470 3697705 Gma12g00636 12 5322541 5322918 PCT
Gma12g00636 12 5322541 5322918 Gma13g02927 13 43826145 43828271 PCT
Gma12g00636 12 5322541 5322918 Gma15g00432 15 3696470 3697705 PCT