Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01349 ATGGGAAACAAAACTACCCTTTTGCTTTTGCTCTTTGTTCTTTGTCATGGAGTGGCCACAACAACAATGGCCTTCCGTGATGATGAGGGTGGTGATAAAAAGTCACCAAAAAGTTTGTTTTTGATGAGCAACTCCACGAGGGTTTTCAAGACTGATGCAGGGGAAATGCGTGTGCTGAAAAGCCATGGTGGTAGGATATTTTATAGGCACATGCACATTGGCTTCATCTCTATGGAACCAAAGTCCTTGTTTGTTCCTCAGTACCTCGACTCCAATCTCATCATATTCATCCGTAGAGGGGAAGCAAAGCTGGGATTCATATATGATGATGAACTAGCGGAAAGGAGATTGAAGACAGGGGACTTGTACATGATTCCATCTGGTTCAGCATTCTATTTGGTGAACATAGGAGAAGGTCAGAGACTTCACGTTATCTGCAGCATTGACCCCTCTACAAGCTTGGGATTAGAGACCTTCCAGTCCTTCTATATTGGGGGAGGAGCCAATTCGCACTCGGTGCTTTCTGGATTCGAACCTGCCATCCTTGAAACTGCATTTAATGAATCAAGAACGGTGGTAGAGGAAATCTTCTCCAAGGAACTAGATGGGCCAATTATGTTCGTGGATGATTCTCATGCACCTAGCTTATGGACTAAATTCCTTCAACTGAAGAAGGATGACAAAGAGCAACAGCTGAAGAAAATGATGCAAGACCAAGAGGAGGATGAGGAGGAGAAGCAAACAAGTAGGTCATGGAGGAAGCTCTTGGAAACCGTATTTGGGAAGGTGAATGAGAAGATAGAGAACAAAGACACTGCTGGTTCCCCTGCCTCTTACAACCTCTACGATGACAAAAAAGCCGATTTCAAAAACGCTTATGGTTGGAGCAAGGCACTGCATGGAGGCGAGTATCCTCCACTCAGCGAACCGGATATTGGAGTTTTACTTGTCAAACTCTCAGCGGGATCCATGTTGGCACCTCATGTGAATCCAATATCAGATGAGTATACCATAGTGCTGAGTGGTTATGGTGAACTGCATATAGGGTATCCAAACGGAAGCAAAGCAATGAAAACTAAAATCAAACAAGGGGACGTGTTTGTTGTGCCAAGATACTTCCCCTTCTGTCAAGTAGCATCAAGGGATGGACCCTTAGAGTTCTTTGGCTTCTCCACTTCTGCAAGGAAGAACAAGCCACAGTTTCTGGCTGGTGCTGCGTCCCTTCTAAGGACCTTGATGGGGCCGGAGCTTTCGGCGGCGTTCGGAGTGAGCGAGGACACGTTGCGGCGCGCTGTTGATGCTCAGCATGAGGCTGTGATACTGCCATCAGCATGGGCTGCACCACCGGAAAATGCAGGGAAGCTGAAGATGGAAGAAGAGCCAAATGCTATTAGAAGCTTTGCCAATGATGTGGTTATGGATGTTTTTTAA 1431 0.4605 MGNKTTLLLLLFVLCHGVATTTMAFRDDEGGDKKSPKSLFLMSNSTRVFKTDAGEMRVLKSHGGRIFYRHMHIGFISMEPKSLFVPQYLDSNLIIFIRRGEAKLGFIYDDELAERRLKTGDLYMIPSGSAFYLVNIGEGQRLHVICSIDPSTSLGLETFQSFYIGGGANSHSVLSGFEPAILETAFNESRTVVEEIFSKELDGPIMFVDDSHAPSLWTKFLQLKKDDKEQQLKKMMQDQEEDEEEKQTSRSWRKLLETVFGKVNEKIENKDTAGSPASYNLYDDKKADFKNAYGWSKALHGGEYPPLSEPDIGVLLVKLSAGSMLAPHVNPISDEYTIVLSGYGELHIGYPNGSKAMKTKIKQGDVFVVPRYFPFCQVASRDGPLEFFGFSTSARKNKPQFLAGAASLLRTLMGPELSAAFGVSEDTLRRAVDAQHEAVILPSAWAAPPENAGKLKMEEEPNAIRSFANDVVMDVF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01349 476 PANTHER OS03G0336100 PROTEIN-RELATED 1 451 - -
Gma11g01349 476 Pfam Cupin 280 426 IPR006045 -
Gma11g01349 476 Pfam Cupin 45 146 IPR006045 -
Gma11g01349 476 PANTHER OS03G0336100 PROTEIN 1 451 - -
Gma11g01349 476 CDD cupin_7S_vicilin-like_N 48 216 - -
Gma11g01349 476 Gene3D Jelly Rolls 32 250 IPR014710 -
Gma11g01349 476 Gene3D Jelly Rolls 267 444 IPR014710 -
Gma11g01349 476 SUPERFAMILY RmlC-like cupins 43 438 IPR011051 -
Gma11g01349 476 SMART Cupin_1_3 279 429 IPR006045 -
Gma11g01349 476 SMART Cupin_1_3 40 194 IPR006045 -
Gma11g01349 476 Coils Coil 218 245 - -
Gma11g01349 476 CDD cupin_7S_vicilin-like_C 288 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01349 Gma-Chr11 11724764 11728082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01349 72 450 Miscellaneous Gene Families AT2G18540 29.750 1.64e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01349 - - gmx:547942 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01349 11 11724764 11728082 Gma11g01349 11 11724764 11728082 ECH
Gma12g00636 12 5322541 5322918 Gma11g01349 11 11724764 11728082 GST
Gma13g02927 13 43826145 43828271 Gma11g01349 11 11724764 11728082 PCT
Gma15g00432 15 3696470 3697705 Gma11g01349 11 11724764 11728082 PCT
Gma11g01349 11 11724764 11728082 Gma13g02927 13 43826145 43828271 PCT
Gma11g01349 11 11724764 11728082 Gma15g00432 15 3696470 3697705 PCT