Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02849 ATGCTTTGCAATGCAAATTATGTTAATGATTGGTACTGTATTTGGATTAAATTTGTAAACATGATTTTGCGACTTTTGTCGTGTCCTGGCCTTGGATGTCTACAATTGACAAGATCAATTAAGCCACTCGAAGGCCTCGTCAAAATCGCAGATCTGGTCAAGTACTGTTCCGAAAACAACAAGCGTCTCATTCATTTCTCTACGTCTGAAGTCTATGGGAAAACCATTGGAAGCTTCCTCCCCAAAGATAGTCCTCTTCGTCAGGATCCTGCATACTACGTACTTAAGGAGGATGAATCTCCTTGTATTTTTGGTTCAATTGAAAAGCAGAGATGGTCCTATGCATGTGCTAAGCAGTTGATTGAGAGGCTTGTTTATGCTGAGGGTGCTGAAAATGGCTTGGAATTCACAATTGTGAGACCTTTTAATTGGATTGGACCACGAATGGATTTCATTCCCGGCATTGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTGGCATGCTTTAGCAATAATCTCCTCCGCGGAGAGCCCCTCAAGCTTGTGGATGGTGGTCAATCCCAGAGGACTTTTGTGTATATTAAGGATGCTATTGAAGCCGTCTTATTGATGATTGAAAATCCTGCCAGGGCCAATGGACATATTTTTAATGTTGGAAACCCAAACAATGAGGTTACAGTTAGGCAGCTTGCTGAAATGATGACACAGGTTTATTCAAAGGTTAGCGGAGAAGCACCTCTGGAAAAACCTACTATTGATGTGAGTTCCAAAGAATTTTATGGTGAGGGATATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATTAATAGGCAGCTTGGCTGGAATCCTAAAACCTCACTTTGGGACCTGCTTGAATCCACTCTCACCTATCAGCACAGGACTTATGCTGAAGCCATTAAGAAAGTCATTGCAAAGCCAGTGGCAAGTTAA 957 0.4222 MLCNANYVNDWYCIWIKFVNMILRLLSCPGLGCLQLTRSIKPLEGLVKIADLVKYCSENNKRLIHFSTSEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTQVYSKVSGEAPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02849 318 Pfam NAD dependent epimerase/dehydratase family 51 219 IPR001509 -
Gma13g02849 318 Gene3D - 44 309 - -
Gma13g02849 318 PANTHER - 53 317 - -
Gma13g02849 318 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 53 317 - -
Gma13g02849 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 51 301 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02849 Gma-Chr13 43003923 43006659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02849 K12449 - gmx:100792879 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02849 13 43003923 43006659 Gma13g02849 13 43003923 43006659 ECH
Gma13g02849 13 43003923 43006659 Gma12g01702 12 37508069 37511176 GST
Gma13g02849 13 43003923 43006659 Gma12g00747 12 6817457 6820221 PCT
Gma13g02849 13 43003923 43006659 Gma11g01557 11 16662929 16676388 PCT
Gma12g00747 12 6817457 6820221 Gma13g02849 13 43003923 43006659 PCT
Gma11g01557 11 16662929 16676388 Gma13g02849 13 43003923 43006659 PCT