Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01702 ATGGCTTCGTCGCGAGTAGATCTGGATGGGAACCCCATAAAGCCCATCACCATTTGCATGATTGGCGCCGGTGGCTTCATTGGGTCCCACCTCTGCGAGAAGCTCATGTCGGAGACCCCTCACAGTGTCCTCGCCTTGGATGTCTACAATGACAAGATCAAACACCTCTTGGAACCCCACACGCTCCCTTGGGCCTCTCGCATCCAGTTCCATCGCCTCAACATCAAGCACGATTCCCGTCTCGAAGGCCTCATCAAAATGTCAGATCTGACTATTAATCTGGCTGCCATTTGCACTCCCGCGGATTACAACACGCGCCCTCTTGACACAATTTACAGCAACTTCATCGACGCGCTTCCTGTGGTGAAGTACTGTTCAGAGAACAACAAGCGTCTCATTCATTTCTCTACGTGTGAAGTCTATGGGAAAACGATTGGAAGCTTCCTCCCCAAAGATAGTCCTCTTCGTCAGGATCCTGCATACTACGTACTTAAGGAGGATGAGTCTCCTTGTATTTTTGGTTCAATTGAAAAGCAGAGATGGTCCTATGCCTGTGCTAAGCAGTTGATTGAGAGGCTTGTTTATGCTGAGGGTGCTGAAAATGGCTTGGAATTCACAATTGTGAGGCCTTTTAATTGGATTGGACCACGAATGGATTTCATTCCCGGCATTGATGGCCCAAGTGAGGGTGTTCCTCGGGTTCTGGCATGCTTTAGCAATAATCTCCTCCGTGGAGAGCCCCTCAAGCTTGTGGATGGTGGCCAATCCCAGAGGACTTTTGTGTATATTAAGGATGCTATTGAAGCTGTCTTATTGATGATTGAAAATCCCGCCAGGGCTAATGGACATATTTTTAATGTGGGAAACCCAAACAATGAGGTTACAGTTAGGCAGCTTGCTGAAATGATGACTCAGGTTTATTCAAAGGTAAGTGGAGAAGCACCTCTGGAAAAACCTACTATTGATGTGAGCTCCAAAGAATTTTATGGTGAGGGATATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATTAATAGGCAGCTTGGCTGGAATCCTAAAACCTCACTTTGGGACCTGCTTGAATCAACTCTCACCTATCAGCACAGGACTTATGCTGAAGCCGTTAAGAAAGTCATTGCAAAGCCCGTGGCAAGTTAA 1164 0.4674 MASSRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMSETPHSVLALDVYNDKIKHLLEPHTLPWASRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTQVYSKVSGEAPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKVIAKPVAS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01702 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 370 IPR036291 -
Gma12g01702 387 PANTHER - 4 386 - -
Gma12g01702 387 Pfam NAD dependent epimerase/dehydratase family 18 288 IPR001509 -
Gma12g01702 387 Gene3D - 16 379 - -
Gma12g01702 387 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 4 386 - -
Gma12g01702 387 CDD Arna_like_SDR_e 17 372 IPR045869 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01702 Gma-Chr12 37508069 37511176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01702 16 382 Miscellaneous Gene Families AT1G02000 21.608 1.53e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01702 K12449 - gmx:100792879 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01702 12 37508069 37511176 Gma12g01702 12 37508069 37511176 ECH
Gma13g02849 13 43003923 43006659 Gma12g01702 12 37508069 37511176 GST
Gma12g01702 12 37508069 37511176 Gma12g00747 12 6817457 6820221 PCT
Gma12g01702 12 37508069 37511176 Gma11g01557 11 16662929 16676388 PCT
Gma12g00747 12 6817457 6820221 Gma12g01702 12 37508069 37511176 PCT
Gma11g01557 11 16662929 16676388 Gma12g01702 12 37508069 37511176 PCT