Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01557 ATGGCGCGAGTGGATCTGGATGGTAACCCCATCAAGCCACTTACGATCTGCATGATCGGCGCTGGCGGGTTCATCGGGTCGCACCTCTGCGAGAAGCTCATGTCCGAAACCCCTCACACCGTCCTCGCCCTCGACGTCTACAGCGACAAGATCAAACACCTCCTGGATCCCGCCGATTCCCCCCTCCCTTGGGCTGGCCGCATCACCTTCCACCGCCTCAACATCAAACACGACTCTCGCCTCGAAGGCCTCATCAAGATGGCAGATCTCACTATTAATCTGGCTGCGATTTGCACTCCCGCGGATTACAACACTCGCCCTCTCGACACCATTTACAGCAATTTCATCGACGCGCTCCCCGTGGTGAAATACTGTTCCGAGAACAACAAGCGCCTTATCCATTTCTCCACTTGCGAAGTGTACGGGAAAACGATTGGAGCCTTTCTCCCTAAAGATAGTCCTCTTCGCAAGGATCCGGCATACTATGTTCTTAAAGAAGACGAATCTCCTTGCATTTTTGGTTCTATCGAGAAGCAGAGGTGGTCTTATGCATGTGCAAAACAGTTGATTGAGAGGCTGATTTTTGCTGAGGGTGCTGAAAATGGCTTGGAGTTCACAATTGTAAGGCCATTTAACTGGATTGGACCTCGAATGGATTTCATTCCTGGGATTGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTTGCTTGCTTTAGCAATAATCTTCTCCGAGGAGAGCCCCTCAAGCTTGTGGACGGTGGCCAGTCCCAGAGAACCTTCATTTACATTAAAGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAACCCTGCCAGGGCCAATGGCCACATATTTAATGTGGGCAACCCTAACAATGAGGTCACTGTTAGGCAGCTTGCTGAAATAATGATTCAGGTTTACTCAAAGGTAAGTGGAGAACAAACTGCTGAAACACCTACCATTGATGTGAGCTCAAAAGAATTTTATGGTGAGGGATATGATGACAGTGACAAGAGAATCCCTGACATGACCATAATAAACAAGCAGCTTGGATGGAATCCTAAGACTTCACTTTGGGACCTGCTTGAATCCACTCTGACATATCAGCACAGGACATATGCTGAAGCCGTTAAGAAAGTCATTGCAAAACCCCTCGCAATGTTCTGCCATATTTTACTGTTATGCATCAACAACGTCGCTTTGGCCGAGTGGTTAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGACCACCGCACCGTACCGCCGGCGGGTTTTCCAGTTTTTGATTCTCATTTCTCACTCGCTCCATTTTCTCTCTCTCGTTCTCTTCTTTCCCTCTCACTCTCTCTGCGCATTTTCCGTTATGAATCGGAGCTGAATCTGAATCTCATCGAACTCGAATTGCGTTGCCGGATCCTTCTGCGGCCTGAGAAGAGAGATAGGGCGGCGCTCCGCTCCCTCGCGGCGGAGGCTCTGACCGGCGATGGCGTTGTCCGGAATGAGAGGAACTTGGCAACATCCGAAAGCGCTTCAAAACCGAGAAGGTATGTTGATGTTATTCTTCAGTTAATTGACAAGGCTGGAGAATTTATTAGTGATGACATTTGGTTTTGTGTGGTGCAATTTGTTACAAACAATGAAGACCTACAGCCCTACACTGCAGCAAAAGCTCGAGAGTATCTTGACAAACCTGCTATACATGAAACAATGGTTAGTGAATATATCCTTGGGGAGTTTGGACACCTTCTAGTTAGACAACCTGGATGTAGTCCAAAGGTAATATTTAACATTATACATGAGAAGCTTCCTACTGTATCCTCTAAGGTTTGTCATAATGCTATAGTAGAAAAAGGTGCATCTCTAATGGATATATTGGCTGAAATGCCTAAATTCCCCAAGCGGCAGAGCAAAGTGCCATTAATGGAACTCCACCTGTCAGCCAACTTAGCCTTGTTTGTAACTGATCAATGTCCTGTTAATGGAACTCCACCTGTCAGCCAACTTAGCCTTGTAAAGATGCCGATCCCCAGTACAAATGTGACAAGAATTGAAACAGATCCAGCAGACAGAAGACAGCTGCGAATGACAGTTGCTTTGGGATAA 2130 0.4732 MARVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETPHTVLALDVYSDKIKHLLDPADSPLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEIMIQVYSKVSGEQTAETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKVIAKPLAMFCHILLLCINNVALAEWLRRVPAKYMGFPRESSNLSGDHRTVPPAGFPVFDSHFSLAPFSLSRSLLSLSLSLRIFRYESELNLNLIELELRCRILLRPEKRDRAALRSLAAEALTGDGVVRNERNLATSESASKPRRYVDVILQLIDKAGEFISDDIWFCVVQFVTNNEDLQPYTAAKAREYLDKPAIHETMVSEYILGEFGHLLVRQPGCSPKVIFNIIHEKLPTVSSKVCHNAIVEKGASLMDILAEMPKFPKRQSKVPLMELHLSANLALFVTDQCPVNGTPPVSQLSLVKMPIPSTNVTRIETDPADRRQLRMTVALG 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01557 709 Pfam NAD dependent epimerase/dehydratase family 16 288 IPR001509 -
Gma11g01557 709 CDD Arna_like_SDR_e 15 372 IPR045869 GO:0016831
Gma11g01557 709 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 370 IPR036291 -
Gma11g01557 709 Gene3D - 505 652 IPR011989 -
Gma11g01557 709 Gene3D - 14 379 - -
Gma11g01557 709 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 386 - -
Gma11g01557 709 PANTHER - 1 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01557 Gma-Chr11 16662929 16676388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01557 K12449 - gmx:100811095 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01557 11 16662929 16676388 Gma11g01557 11 16662929 16676388 ECH
Gma12g00747 12 6817457 6820221 Gma11g01557 11 16662929 16676388 GST
Gma13g02849 13 43003923 43006659 Gma11g01557 11 16662929 16676388 PCT
Gma12g01702 12 37508069 37511176 Gma11g01557 11 16662929 16676388 PCT
Gma11g01557 11 16662929 16676388 Gma13g02849 13 43003923 43006659 PCT
Gma11g01557 11 16662929 16676388 Gma12g01702 12 37508069 37511176 PCT