Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02835 ATGCAGAGTCTTTCACCACCTACTTCCAACGCGCTCAATTTGAAGCATGTTTTTCGCCCGCGACTTGGCGCGTCAAGCCGAATCTCTGTCAAATGCGCTTTTGGGTTTGAGCCGGTGAGCTACGGAGTCGGCTCCAGCCGAGCCGATTGGCAGAGCTCCTGCGCCATCTTAGCCAGCAAGGTCGTTTCTCAGGAACAACCCTCCGCTGACCAGAACAGCGGCACCACCGACCACATCGCCGCCGTCAACGGTCACAAAGCCGCCGTCAGCGACTTCCAACTCGTTCCAATTGGAAACCTAGCAGAGGCCAACAACAAGCCGCTCCCGCCGAAGCCGCTCACGATCTCCGACCTCTCGCCGGCCCCGATGCACGGCTCCAAGCTCCGCGTCGCGTACCAAGGCGTTCCCGGCGCGTACTCTGAAGCCGCTGCCGGCAAGGCCTATCCGAACTGCGAGGCCATTCCGTGCGACCAGTTCGAGGTGGCGTTCCAGGCGGTGGAGCTCTGGATCGCCGATCGGGCGGTTTTACCGGTTGAAAACTCACTCGGCGGTTCGATCCACCGGAACTACGATCTCCTCCTCCGCCACCGCCTTCACATAGTTGGCGAGGTCCAGCTCCCGGTCCATCACTGCCTCCTCGCTCTCCCCGGCGTCCGAAAGGAGTTCCTCACGCGCGTGATTTCGCATCCGCAGGCACTCGCGCAGTGCGAGCACACTCTCACCAAACTCGGCCTGAACGTGGCGCGCGAGGCCGTGGACGACACCGCCGGCGCTGCCGAGTTCGTCGCCAGCAACAATCTCCGCGACACCGCCGCCATCGCGAGCGCACGCGCGGCGGAGCTCTACGGCCTGAACGTGATGGCGGACGGAATCCAAGACGATCCGAGCAACGTCACGCGGTTTGTGATGCTCGCGAGAGAGCCTATCATCCCGCGCACGGACCGTCCTTTCAAGACGAGCATTGTTTTCGCACACGACAAAGGAACTTCGGTGCTTTTCAAAGTGCTTTCCGCGTTCGCGTTTCGCAACATCAGTTTGACGAAGATCGAGTCGCGGCCGCACCGGAACCGTCCGATTAGGCTGGTGGATGACGCGAACGTTGGAACCGCGAAGCACTTTGAGTACTTGTTCTACGTTGATTTTGAGGCTTCCATGGCTGAGGTTAGGGCACAGAACGCGTTGGCAGAGGTGCAGGAATTCACGTCTTTCTTGCGAGTGTTAGGGAGTTACCCTATGGACATGACACCCTGGACACCTTCCTCCCGGGGAGACTAG 1275 0.6047 MQSLSPPTSNALNLKHVFRPRLGASSRISVKCAFGFEPVSYGVGSSRADWQSSCAILASKVVSQEQPSADQNSGTTDHIAAVNGHKAAVSDFQLVPIGNLAEANNKPLPPKPLTISDLSPAPMHGSKLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVASNNLRDTAAIASARAAELYGLNVMADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYLFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWTPSSRGD 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02835 424 ProSitePatterns Prephenate dehydratase signature 2. 346 353 IPR018528 GO:0004664|GO:0009094
Gma13g02835 424 Gene3D - 124 212 - -
Gma13g02835 424 ProSitePatterns Prephenate dehydratase signature 1. 282 304 IPR018528 GO:0004664|GO:0009094
Gma13g02835 424 Gene3D - 213 294 - -
Gma13g02835 424 Gene3D - 313 414 - -
Gma13g02835 424 ProSiteProfiles ACT domain profile. 320 411 IPR002912 -
Gma13g02835 424 PANTHER AROGENATE DEHYDRATASE 31 421 - -
Gma13g02835 424 SUPERFAMILY Periplasmic binding protein-like II 129 312 - -
Gma13g02835 424 CDD ACT_CM-PDT 318 411 - -
Gma13g02835 424 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 31 421 - -
Gma13g02835 424 CDD PBP2_Ct-PDT_like 127 308 - -
Gma13g02835 424 SUPERFAMILY ACT-like 301 413 IPR045865 -
Gma13g02835 424 Pfam Prephenate dehydratase 130 308 IPR001086 GO:0004664|GO:0009094
Gma13g02835 424 ProSiteProfiles Prephenate dehydratase domain profile. 129 306 IPR001086 GO:0004664|GO:0009094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02835 Gma-Chr13 42870504 42872505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02835 K05359 - gmx:100781285 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02835 13 42870504 42872505 Gma13g02835 13 42870504 42872505 ECH
Gma13g02835 13 42870504 42872505 Gma12g01716 12 37697997 37700039 GST
Gma13g02835 13 42870504 42872505 Gma12g00760 12 6996408 6997694 PCT
Gma13g02835 13 42870504 42872505 Gma11g01545 11 16494553 16496275 PCT
Gma12g00760 12 6996408 6997694 Gma13g02835 13 42870504 42872505 PCT
Gma11g01545 11 16494553 16496275 Gma13g02835 13 42870504 42872505 PCT