Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01545 ATGCAGACCCTCAATCAACCGTGCCCCAACCCTCTCAACTATCTAACCCGAGCGCGACACTCGGCTATTCGGTTCGCGCCGACCCGATTCACCGTCAAATGCGGCTACGGCTTTGAATCCGCGAGTTTCTCGCAGGGAGTCGGCGCGAGCCGAGCCGATTGGCAAAGCTCGTGCGCCATCTTAGCCAGTAAAGTCGTGTCGCAGAGGGAAGATTCTCCCGCCCACGGCGGCGACAACAACAACAACGTCGGCGCCGTGAACGGCCACAACGCCGCCGTAACGAATCTAAATCTCGTACCTGTCAAAGCCGATGATGAAAACATCAAGCCGATTCCGCCGAAGCCGCTCACGATCTCCGACCTGTTGCCGGCGCCGATGCACGGCTCGCAGCTGCGCGTGGCGTACCAAGGCGTTCCCGGCGCGTACTCCGAAGCCGCGGCGGGGAAAGCGTATCCGAACGGAGAGGCGATTCCGTGTGACCAGTTCGAGGTGGCGTTTCAAGCGGTGGAGCTCTGGATCGCGGATCGGGCGGTTTTACCGGTCGAAAACTCCTTCGGCGGCTCGATCCACCGCAATTACGACCTCCTCCTCCGCCACCGCCTCCACATCGTCGGCGAGGTCCAGCTCCCAGTGCACCACTGCCTCCTCGCTCTCCCCGGCGTCCGCAAGGAGTTCCTCGAGCGCGTGATCTCACATCCGCAGGCCTTAGCGCAGTGCGAGCACTCACTTACAAAACTCGGCCTCACCGTGGCGCGTGAGGCCGTCGACGATACCGCCGGCGCTGCCGAGTTCGTCGCCAAGAACGACCTCCGCTCCACGGCGGCGATCGCGAGCGCGCGCGCGGCGGAGCTCTACGGCCTCCAGATCCTGGCCGACGGAATCCAGGATGATCCGAATAACGTGACGCGGTTCGTGATGCTGGCGCGCGAACCGATCATTCCGCGCACGGATCGGCCGTTCAAGACGAGCATCGTGTTCGCGCACGATAAAGGAACCTCAGTGCTCTTCAAAGTGCTTTCCGCGTTTGCGTTCAGAAACATAAGCTTAACAAAGATCGAGTCCAGGCCTCACCGTAGCCGTCCGATTCGCGTGGTTGATGATGAGAGTGAAGGAACCGCGAAGCACTTTGAGTATCTGTTTTACATTGATTTCGAAGCTTCTATGGCTGAGGTTAGGGCACAGAACGCACTCGCTGAGGTTCAAGAATTCACTTCCTTCTTGCGAGTCTTGGGGAGTTACCCTATCGATATGTCACCCTGGACTCCCTCTTGTCCGCGCCAAAATTAA 1287 0.5975 MQTLNQPCPNPLNYLTRARHSAIRFAPTRFTVKCGYGFESASFSQGVGASRADWQSSCAILASKVVSQREDSPAHGGDNNNNVGAVNGHNAAVTNLNLVPVKADDENIKPIPPKPLTISDLLPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNGEAIPCDQFEVAFQAVELWIADRAVLPVENSFGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLERVISHPQALAQCEHSLTKLGLTVAREAVDDTAGAAEFVAKNDLRSTAAIASARAAELYGLQILADGIQDDPNNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRSRPIRVVDDESEGTAKHFEYLFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPIDMSPWTPSCPRQN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01545 428 ProSiteProfiles Prephenate dehydratase domain profile. 132 309 IPR001086 GO:0004664|GO:0009094
Gma11g01545 428 PANTHER AROGENATE DEHYDRATASE 21 424 - -
Gma11g01545 428 Gene3D - 316 417 - -
Gma11g01545 428 Gene3D - 127 215 - -
Gma11g01545 428 Gene3D - 216 297 - -
Gma11g01545 428 Pfam Prephenate dehydratase 133 311 IPR001086 GO:0004664|GO:0009094
Gma11g01545 428 SUPERFAMILY ACT-like 304 415 IPR045865 -
Gma11g01545 428 ProSitePatterns Prephenate dehydratase signature 2. 349 356 IPR018528 GO:0004664|GO:0009094
Gma11g01545 428 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 21 424 - -
Gma11g01545 428 CDD ACT_CM-PDT 321 414 - -
Gma11g01545 428 ProSiteProfiles ACT domain profile. 323 414 IPR002912 -
Gma11g01545 428 ProSitePatterns Prephenate dehydratase signature 1. 285 307 IPR018528 GO:0004664|GO:0009094
Gma11g01545 428 SUPERFAMILY Periplasmic binding protein-like II 132 315 - -
Gma11g01545 428 CDD PBP2_Ct-PDT_like 132 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01545 Gma-Chr11 16494553 16496275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01545 K05359 - gmx:100800074 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01545 11 16494553 16496275 Gma11g01545 11 16494553 16496275 ECH
Gma12g00760 12 6996408 6997694 Gma11g01545 11 16494553 16496275 GST
Gma13g02835 13 42870504 42872505 Gma11g01545 11 16494553 16496275 PCT
Gma12g01716 12 37697997 37700039 Gma11g01545 11 16494553 16496275 PCT
Gma11g01545 11 16494553 16496275 Gma13g02835 13 42870504 42872505 PCT
Gma11g01545 11 16494553 16496275 Gma12g01716 12 37697997 37700039 PCT