Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02657 ATGAGTACCTACGACACCAACCCCTTCGCCCAAGACGAGGTTAATCCCTTCGCCGATGGAACTGCGAAAGGAAATGCATCGGGGCAATCAAATCGTGGTGGTGGTGCAGCCTCAAGGCTTTCACCCCTGTCTCCTGAGCCTTATGATCGTGCAGCAACTGTTGACATTCCTCTTGGATCCTCAAAGgacctcgaagccaaggagaaggagctccaagctagagaggctgaattgaaaagaagggaacagGAGCTAAAACGAAAGGAAGATGCTATAGCACGAGCTGGAATTGTTATAGAGGATAAAAATTGGCCACCTTTTTGCCCCATCATTCATCACGACATTGCAAATGAAATACCTATACATCTTCAATCAATCCAGTATGTTGCATTTACAACATGGTTAGGTTTGGTTATATGCCTTTTATGGAATATTATAGCAGTTACTGTAGCTTGGATCAAAGGAGAAGGTCTTTCAATCTGGTTTCTATCTATCATATACTTTATTTCCGGTGTTCCAGCATCCTATGTGATGTGGTATCGTCCTCTTTATCGTGCGACAAGGACGGATAGTGCTCTAAGGTTTAGTTTGTTTTTCTTGTCTTACGGGGTGCACATTCTCTTTTGCGTTTATGCTGCAGTTGCTCCTCCAATTATCTTCAAAGGGAAATCTCTCACAGGTATTCTGCCTGCGTTTGAGGTATTGGACTACAATGCATTGGTTGGGATACTCTACTTTATTGGGTTTGGATTTTTCTGCATTGAATCACTGCTGAGCATTTGGGTTATTCAGCAAGTATACATGTACTTTCGGGGCAGTGGAAAGGCTGCAGAGATGAGGCGTGCAGCTGCGCAAGGGGCCATGAGGGCAGCTCTATGA 879 0.4107 MSTYDTNPFAQDEVNPFADGTAKGNASGQSNRGGGAASRLSPLSPEPYDRAATVDIPLGSSKDLEAKEKELQAREAELKRREQELKRKEDAIARAGIVIEDKNWPPFCPIIHHDIANEIPIHLQSIQYVAFTTWLGLVICLLWNIIAVTVAWIKGEGLSIWFLSIIYFISGVPASYVMWYRPLYRATRTDSALRFSLFFLSYGVHILFCVYAAVAPPIIFKGKSLTGILPAFEVLDYNALVGILYFIGFGFFCIESLLSIWVIQQVYMYFRGSGKAAEMRRAAAQGAMRAAL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02657 292 MobiDBLite consensus disorder prediction 22 37 - -
Gma13g02657 292 Coils Coil 61 91 - -
Gma13g02657 292 Pfam SCAMP family 102 272 IPR007273 GO:0015031|GO:0016021
Gma13g02657 292 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 292 - -
Gma13g02657 292 MobiDBLite consensus disorder prediction 1 61 - -
Gma13g02657 292 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 292 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02657 Gma-Chr13 41307103 41312163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02657 4 292 Miscellaneous Gene Families AT1G11180 65.541 9.40e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02657 K19995 - gmx:100812020 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02657 13 41307103 41312163 Gma12g01902 12 39652337 39658235 GST
Gma13g02657 13 41307103 41312163 Gma12g00966 12 10087224 10094174 PCT
Gma13g02657 13 41307103 41312163 Gma06g02654 06 50065946 50073015 PCT
Gma12g00966 12 10087224 10094174 Gma13g02657 13 41307103 41312163 PCT
Gma06g02654 06 50065946 50073015 Gma13g02657 13 41307103 41312163 PCT