Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00966 ATGAGTCGCTACGATCCCAATCCCTTCGACGAAGAACCAATCGAGGTTAATCCATTCGCGGATGGAACAGCTAAAGGAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACTAACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCAGAGCCTTACGATCGTGGGGCAACTATTGACATCCCCCTTGATAATGCAAAGGACATAAAAGCAAAGGAGAAGGAACTTCAAGCTAAAGAGGCTGAATTGAAAAGAAGGGAACAGGAACTAAAACGAAGGGAAGATGCTATAGCACGAGCTGGAATAGTTATAGAGGAGAAAAATTGGCCACCTTTTTTTCCCATCATTCATCATGACATTGCAAAGGAAATACCAATACATCTTCAAAGGATCCAGTACATTGCATTTACAACATGGTTGGGTTTGGTTCTGTGTCTTTTATGGAATATTGTGGCAGTTACTACTGCTTGGATCAAAGGAGAAGGTCCAACCATCTGGTTTCTTGCAATTATCTATTTTATTTCTGGTGCTCCAGGATCCTATGTGTTGTGGTATCGCCCTCTTTATCGTGCTATGAGGACTGACAGTGCTCTGAAATTTGGCTGGTTCTTCTTGCTTTACATGTTGCACATTGCCTTTTGCATTTTAGCGGCAGTTGCTCCACCAATTATCTTCAAAGGAAAATCTCTCACAGGCATTTTGGCTGCGATTGACGTGTTGGGCGACAATGCATTGGTTGGGATATTCTACTTCATTGGATTTGGCTTTTTTTGTCTCGAGTCAGTGCTGAGCATCTGGGTTATACAGCAAGTATATATGTACTTCCGTGGCAGTGGCAAGGCTACAGTTTTAAAACGTGAGGCTGCCAGAGGCACAATGATGGCAGCTCTATGA 921 0.4354 MSRYDPNPFDEEPIEVNPFADGTAKGKGSGQSSYSGGAFYTTNTGSVPSANSRLSPLPPEPYDRGATIDIPLDNAKDIKAKEKELQAKEAELKRREQELKRREDAIARAGIVIEEKNWPPFFPIIHHDIAKEIPIHLQRIQYIAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMRTDSALKFGWFFLLYMLHIAFCILAAVAPPIIFKGKSLTGILAAIDVLGDNALVGIFYFIGFGFFCLESVLSIWVIQQVYMYFRGSGKATVLKREAARGTMMAAL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00966 306 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 306 IPR007273 GO:0015031|GO:0016021
Gma12g00966 306 Coils Coil 75 105 - -
Gma12g00966 306 MobiDBLite consensus disorder prediction 1 68 - -
Gma12g00966 306 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 306 - -
Gma12g00966 306 MobiDBLite consensus disorder prediction 26 53 - -
Gma12g00966 306 Pfam SCAMP family 115 286 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00966 Gma-Chr12 10087224 10094174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00966 2 278 Miscellaneous Gene Families AT1G61250 71.886 8.65e-146 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00966 K19995 - gmx:100796729 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00966 12 10087224 10094174 Gma12g00966 12 10087224 10094174 ECH
Gma12g00966 12 10087224 10094174 Gma06g02654 06 50065946 50073015 GST
Gma13g02657 13 41307103 41312163 Gma12g00966 12 10087224 10094174 PCT
Gma12g01902 12 39652337 39658235 Gma12g00966 12 10087224 10094174 PCT
Gma12g00966 12 10087224 10094174 Gma13g02657 13 41307103 41312163 PCT
Gma12g00966 12 10087224 10094174 Gma12g01902 12 39652337 39658235 PCT