Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01298 ATGGAGGTTGGGGAAATGGACAGAAAGGAGCCACAAGTTGAGGTTCCTTGGAGCCCCGGCACCCCTATTAAGGCCGTTCCTATGAAACCAATGCCGATCTGCTCGCCTGGGGAGAGAAATCAAATGGGTCATCATGCAAATGGAGCAGTTGCATGTGATGAATTTTCACACGGCCAAGACAAAATTGGTGGGTTAGGTGATGGGTCAAATGTTGCCACTGACGGTGGCAAAACTTGTGAACCGACAGATTCGGATGCTGTTTCCAACTATAGCAAACTTGGGTTTTGTGAACAATTGTTTGCGGTTGAGGCTGAATCGAGGAACTCTAGTGTGACACAAGGGAATAATGATGGATTGAAGAATCCTTTTGTTCCTTCATTCATCCTTGACAATGTCCAAGACCCTCAGGAAACATACATTGCTTGCTGTAGCATGAAAACTTCACAGGATACCCTATTTACACTTGACAATGCCAACAAAGAAGGCATAAAAATAGCATCAATGCAAGTCAATATGGAAGAAAAGGATCCAGGAGGGGAAGAGAGAAATGCCCCTGCCAATAAGCTTGACAATAATGTACCGCCAAACAGCAAAGAACTCTGTGACCCTGCAATGGAATTTGCTGCTGTTTCTTCACCATTGAAAGAGAATCACAACCCAGATAAGGGAAGCAGTCATGATACTGATCTTAATAAAACACCACAACAAAAACCAAGGAGAAGAAAGCACCGTCCCAAGGTCATCAAAGAAGGCAAACCCAAAAGAACTCGGAAGCCTGCTACCCCAAAGCCTGTTCAACCAAAAGAAAACACACCTGTCAAGAGGAAGTATGTGAGAAAGAATACAGTGAACAAGACTTCTACTCCTCCTACCGAAGAGGCTAGGGAATTGAGTAAAGAAATGTCTTGTAAAAGGTCCTTAAATTTCGACATAGGAACAACAGATGAAAGTTCTGCTGCCATAGATAATACAACTGCACTATTGGGAAAAGAAAATGGTATTCTCGTTCAAGAAACAAATGTAGGTTCTGCATTTGATCTAAACACGTCCATGAAGCAGGCATCAAACAGTTACATGTCACTACCAGAAGACAAACAAGCCCTTAATACATCTCCTTCGAGAAGAAAAAGCTCAGGGACAAAGCCAGAGGAAAACACGCCTCCCAAGAGGAAGTATGTGAGAAGGAAAGGAGTGAACAAGACTTCTGCTCCTCCAATAGAAGTTCCTGGAAATTTGACTAAAGAAACAATGTCTGCATCTGCCCAAACATCATGCACAGAGTCCATATTTGATGAAAGAGCAAGAGATCAAAGTTATACAGTCAAAGAGAATCCAACTGGGCATCCAGGCAGTGAAATTGGTGTACTCATGAAGGAAATGAATGTGGGCCTTGCCTATGATTTAAACACTTCCAGGAAGCAGGCATTAAATGATGACGCGACATTACCTAAGGACACACAAGCCCCAAGTTCATCTTCAAAAATCAATCTCCCTGGGACAAAGAGAAAAGAAAACCTGACTGGCAAGAGGAAGAATGCGGGGAAAAAAGGATCAAATCCGTCTCCTATTCCTCCAACAGAAATTACAGAATTGACTGAAGCAAGGATGCTTGAATCTAACATGTCATGGAGAAGATCCTTAAATTTGGATATGGGAAATGTAGGCAGAGAAAATTTGGATTTGCACACAGGGAAGGAAAATCTGGTGTTAGAGGAAAGAATAGTAGGTCCCACCTATAAAGACACTTGGTTGAAAGAGGCAGTAAATATTTGCATGTCATTACCTGAGGAAACACGACGCCCAAGTACATCTATTTCAAAATGCACTTCTGCTGGGTCAAAGCTGAATGCCAACTCTGTAGAGAAGAAAAACAAAAAAGGCCGGGCAACTGCTCGGGGTGGAAACATCAGTAATAGTCAAAGTTCATCAATAAGGTCACAAATGGTTGGTTCAAAGAGAAAACATTCTGGCACCTTTAATCGTGCAGATGACAGCAGCATGAATCTGATTGGAGTGCAATATAATGGACTGCCCTCATACCAAACTAGCATTTGCCTTCAGTTTCCAAAAATACAGAAGAAAAGAACTGAAACGGGGAATGCAACAAAAGAAGTCCAACAGACATGCCCTCAGGAAGATGCTCTAGGACATCCATATGCATCAAGCTCCAGCTGCTGGACTTATGGTTCTGGATATAATACAGCTAGAGTCCCAGCCACAAGTGGATCGACAGAAAAATTAAAAATTGATAATACTCAAACATTCAATGAGTTCGTCTTGTCTTTGAAAAGGCTGGCAGAAAGATCTCAAACCTCTACTTGTGATCATGGTTCTCTAACCAGAATTAGAAACTGTGATACTGAACCAAATTATACTGCAAAACAAGTAGGCGTCTCTGGCAGAGAAACATTTGGGGATGCAATTGGTGCTTTAGTTGCAGAGACATGTACACCACCCACAAAAAAGAAGCGGAATAGAAAGAAAAGTGTTCCTTCCAGTTCAGCACATTCTACCACAAATGAGATGCTACAGAACCATAATTTTACATTGGAAAATTACCCTCTGCCAATGGGGAAGCCATCAGACATTGTTCCTGAAGTACTATGGAACACCATGAACAATATTGATGCATTAACATTGCAATTTAGACAACTAAACTTAAACACAGAAGTCAGAGACCTTGCATTTCATGAGCAGAATGCACTTGTCCCTTATAAACAGCAAAACAGCCTTATCCATGGAGATGGGGTCATCGTTCCCTTTCACATTAAGAAACAGCATCTACGACCAAAGGTCGACCTTGATGATGAGACTGATAGAGTGTGGAAGCTTTTGCTGTTAGATATAAACAGTCATGGGATTGATGGAACAGATGAAGATAAGGCAAAGTGGTGGGAAGAAGAACGAAATGTGTTTCGAGGACGAGCCGACTCTTTTATTGCACGAATGCATCTTGTACAAGGAGACAGACGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTGGTTGGAGTTTTCCTCACCCAAAATGTCACTGACCATCTTTCCAGCTCTGCATTCATGTCCCTTGCTGCTCGATTTCCCAAAATTTCAAGCAGCATGTGCAAAACACACCATGCAGAAGACACAAGACTGGTAGTCAACAAACCACAAGTGCATATAGTGGAACCGGAAGAGAGCACTGAATGGGATGTAAAATTATTGAATCAATCTGTTTATGACCAGCCTTCTCCAACAATAGATATAGTTGAGCATTCTCGAGAAAAAGAAGCCTTCAACAGCAATGAATCCTGTGGAACTACCAGCAGTGTAATTAGCTTAACAGATGAATCAAACTCCAGATTGTCAGAATTACCTCAAAAGAATATTAAGGAACACTGTAGTCCAATGAGAAGTGGACTACTTAGTGCTTCAATTGAGGAAGGAGAAGAAAAATCATGTTACGATGGTGATAGGAAAGAGTTAAATGACATAGTTTCATCCCAAGGCTCTGTTATTTCATCTCAAATATCTGGAGATTTTTCAAATGATCAAAATCCTGAGAAAATAGGATCATGCTCAGATAGCAACTCAGAAGTAGAAGTTTTGTCCAGCACAGCAAAGTACAACCATTTTGGTAGCAACACTTCCTTCAGTAAACTCCTCGAAATGGTTAGTTCAACCAAGTTTTATGCAGATAACAGTCAAAAAAGCGAATCAATTGAGAACTTAAGAGATGCATATGATCAACATATACACAGGCAGCATAACAACACAATAGAAAGCTTGAAAAAATCAAGTGCTACTCAGGGCTCTGCAGAAGCATCCATCATCCTATCTGATGAATATACTTTGAAACTCGCCCCCAACTTAGGAATGCTTGATGTTAACTGCTTTGATCCTTTCAAAACAGAAGCATCAACAAGTGACTTCTTAAAAAAAAAGGATGAAAATAGCATGAACAGATCTAGTCTTCAAACAACAGAACCTGGAGGCCAAGTTGCAACTACCCATTCTCAAAGTATTGTATCTCAAGTCCATCCTCAGGAACAAAGCAATCACCAGCAGCAAAGTTTTTTCAACATTTCTGGACAAACTCAAGATCTTATGCAGAAAGGAAGGGGGTCAGATCTTGGTGAGCAAAAAAATGCCATGAGGAATGGAACCAATGAGATAAGTTCTGCCCCAATAAAATTTAAGAGCAAGGAACAAGAAAAAGAGAAAAAGGATGATTTTGACTGGGATAGTTTAAGAATTGAAGCACAGGCTAAGGCTGGGAAAAGAGAAAAGACAGATAACACCATGGATTCTTTGGACTGGGATGCTGTGAGATGTGCAGATGTCAGTGAAATCGCTGAGACCATCAAAGAAAGGGGCATGAACAACAGGCTTGCAGATCGTATTAAGAATTTCTTAAATCGATTGGTTGAAGAACATGGAAGCATTGACCTTGAATGGCTTAGAGACGTTCCACCTGACAAAGCAAAAGAATACTTGCTCAGCATAAGAGGATTGGGACTAAAAAGTGTGGAATGTGTGCGGCTTTTAACACTGCACCATCTTGCCTTCCCGGTAGACACAAATGTCGGACGTATAGCAGTACGACTGGGATGGGTCCCTCTACAGCCACTGCCTGAGTCACTGCAGTTGCATCTCCTAGAATTGTACCCAGTGTTGGAGTCAATACAAAAATATCTCTGGCCTCGACTATGCAAGCTAGATCAGGAAACACTATATGAGCTACATTACCAGATGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGCCCAATGAGAGGAGAATGTAGACACTTCGCTAGTGCATTTGCAAGTGCAAGGCTTGCACTGCCTGGACCAGAGCAGAAGAGTATAGTTAGCACAACTGGAAATAGTGTGATTGACCAGAACCCATCTGAAATCATCAGTCAGTTGCACTTGCCTCCCCCTGAGAGCACGGCCCAAGCAGATGATATTCAACTAACAGAAGTGAGCAGACAGTTGGAATCAAAATCTGAAATAAATATTTGCCAACCTATCATTGAAGAGCCCACAACTCCAGAGCCAGAATGCTTGCAAGTATCACAAACTGATATAGAGGATGCTTTCTATGAGGATTTATGTGAAATTCCAACCATCAATCTTAACATAGAAGAGTTCACTATGAATTTACAAAATTACATGCAAGAAAAAATGGAACTTCAAGAAGCTGAAATGTCAAAGGCATTGGTTGCTTTGAATCCAGAAGCTGCTTCCATTCCTATGCCCAAGCTAAAGAATGTGAGCCGATTACGAACAGAGCATTGTGTTTATGAACTCCCAGATACGCATCCTCTTCTCCAAGGGTGGGACACACGAGAGCCTGATGATCCAGGCAAATATCTTCTTGCTATATGGACTCCAGGTGAGACAGCAAATTCTATACAGCCACCAGAAAGCAAATGCAGCTCTCAAGAAGAATGTGGCCAACTCTGTAATGAGAATGAATGTTTCTCGTGCAACAGTTTCCGTGAAGCAAATTCTCAGATAGTTAGAGGGACACTCCTGATACCATGTCGAACAGCTACACGGGGGAGCTTTCCACTGAATGGCACCTATTTCCAAGTCAATGAGGTATTTGCTGACCATGACTCAAGTCTCAACCCAATTAGTGTGCCTCGAAGTTGGATCTGGAACCTCAACAGGCGAACAGTATATTTTGGAACCTCCGTAACAACAATATTTAAAGGTTTAACAACACAAGAAATTCAACAATGCTTTTGGAGAGGGTATGTCTGTGTGCGGGGGTTTGACAGGGAAGCACGAGCACCCCGTCCTCTGATGGCTAGACTACATTTCCCAGCTAGCAAGTTGGCCAAGACAAAAGAGAGGACAAAAAAGGAGTCGAGTTCAACGGCAAAATCACGGGGATCGAAACCAAATCCAGAACAGCCGGAATTGATTGCCAACAGTAGCAACCTTCTACAGACGGGAAGAGACTGA 5982 0.4181 MEVGEMDRKEPQVEVPWSPGTPIKAVPMKPMPICSPGERNQMGHHANGAVACDEFSHGQDKIGGLGDGSNVATDGGKTCEPTDSDAVSNYSKLGFCEQLFAVEAESRNSSVTQGNNDGLKNPFVPSFILDNVQDPQETYIACCSMKTSQDTLFTLDNANKEGIKIASMQVNMEEKDPGGEERNAPANKLDNNVPPNSKELCDPAMEFAAVSSPLKENHNPDKGSSHDTDLNKTPQQKPRRRKHRPKVIKEGKPKRTRKPATPKPVQPKENTPVKRKYVRKNTVNKTSTPPTEEARELSKEMSCKRSLNFDIGTTDESSAAIDNTTALLGKENGILVQETNVGSAFDLNTSMKQASNSYMSLPEDKQALNTSPSRRKSSGTKPEENTPPKRKYVRRKGVNKTSAPPIEVPGNLTKETMSASAQTSCTESIFDERARDQSYTVKENPTGHPGSEIGVLMKEMNVGLAYDLNTSRKQALNDDATLPKDTQAPSSSSKINLPGTKRKENLTGKRKNAGKKGSNPSPIPPTEITELTEARMLESNMSWRRSLNLDMGNVGRENLDLHTGKENLVLEERIVGPTYKDTWLKEAVNICMSLPEETRRPSTSISKCTSAGSKLNANSVEKKNKKGRATARGGNISNSQSSSIRSQMVGSKRKHSGTFNRADDSSMNLIGVQYNGLPSYQTSICLQFPKIQKKRTETGNATKEVQQTCPQEDALGHPYASSSSCWTYGSGYNTARVPATSGSTEKLKIDNTQTFNEFVLSLKRLAERSQTSTCDHGSLTRIRNCDTEPNYTAKQVGVSGRETFGDAIGALVAETCTPPTKKKRNRKKSVPSSSAHSTTNEMLQNHNFTLENYPLPMGKPSDIVPEVLWNTMNNIDALTLQFRQLNLNTEVRDLAFHEQNALVPYKQQNSLIHGDGVIVPFHIKKQHLRPKVDLDDETDRVWKLLLLDINSHGIDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVTDHLSSSAFMSLAARFPKISSSMCKTHHAEDTRLVVNKPQVHIVEPEESTEWDVKLLNQSVYDQPSPTIDIVEHSREKEAFNSNESCGTTSSVISLTDESNSRLSELPQKNIKEHCSPMRSGLLSASIEEGEEKSCYDGDRKELNDIVSSQGSVISSQISGDFSNDQNPEKIGSCSDSNSEVEVLSSTAKYNHFGSNTSFSKLLEMVSSTKFYADNSQKSESIENLRDAYDQHIHRQHNNTIESLKKSSATQGSAEASIILSDEYTLKLAPNLGMLDVNCFDPFKTEASTSDFLKKKDENSMNRSSLQTTEPGGQVATTHSQSIVSQVHPQEQSNHQQQSFFNISGQTQDLMQKGRGSDLGEQKNAMRNGTNEISSAPIKFKSKEQEKEKKDDFDWDSLRIEAQAKAGKREKTDNTMDSLDWDAVRCADVSEIAETIKERGMNNRLADRIKNFLNRLVEEHGSIDLEWLRDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQETLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKSIVSTTGNSVIDQNPSEIISQLHLPPPESTAQADDIQLTEVSRQLESKSEINICQPIIEEPTTPEPECLQVSQTDIEDAFYEDLCEIPTINLNIEEFTMNLQNYMQEKMELQEAEMSKALVALNPEAASIPMPKLKNVSRLRTEHCVYELPDTHPLLQGWDTREPDDPGKYLLAIWTPGETANSIQPPESKCSSQEECGQLCNENECFSCNSFREANSQIVRGTLLIPCRTATRGSFPLNGTYFQVNEVFADHDSSLNPISVPRSWIWNLNRRTVYFGTSVTTIFKGLTTQEIQQCFWRGYVCVRGFDREARAPRPLMARLHFPASKLAKTKERTKKESSSTAKSRGSKPNPEQPELIANSSNLLQTGRD 1993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01298 1993 MobiDBLite consensus disorder prediction 236 261 - -
Gma13g01298 1993 SUPERFAMILY DNA-glycosylase 974 1608 IPR011257 GO:0003824|GO:0006281
Gma13g01298 1993 MobiDBLite consensus disorder prediction 480 527 - -
Gma13g01298 1993 Pfam RRM in Demeter 1846 1946 IPR028925 -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 1092 1114 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 631 654 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 621 662 - -
Gma13g01298 1993 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 374 1963 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gma13g01298 1993 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 135 370 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gma13g01298 1993 MobiDBLite consensus disorder prediction 1094 1114 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 1307 1349 - -
Gma13g01298 1993 Pfam Permuted single zf-CXXC unit 1811 1843 IPR028924 -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 1363 1400 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 1949 1993 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 1967 1993 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 214 300 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 816 841 - -
Gma13g01298 1993 Gene3D - 1508 1623 IPR023170 -
Gma13g01298 1993 Gene3D Hypothetical protein; domain 2 1412 1507 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 480 500 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 173 200 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 1 24 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 219 235 - -
Gma13g01298 1993 CDD ENDO3c 1433 1551 IPR003265 GO:0006284
Gma13g01298 1993 SMART ccc3 1586 1606 IPR003651 GO:0051539
Gma13g01298 1993 MobiDBLite consensus disorder prediction 377 391 - -
Gma13g01298 1993 SMART endo3end 1413 1585 IPR003265 GO:0006284
Gma13g01298 1993 Coils Coil 1717 1737 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 1315 1349 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 360 425 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 1949 1966 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 360 376 - -
Gma13g01298 1993 MobiDBLite consensus disorder prediction 1376 1391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01298 Gma-Chr13 27433988 27444764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01298 - - gmx:100779756 3888.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01298 13 27433988 27444764 Gma13g01298 13 27433988 27444764 ECH
Gma10g00607 10 6449222 6465343 Gma13g01298 13 27433988 27444764 GST
Gma03g01756 03 43627950 43638855 Gma13g01298 13 27433988 27444764 PCT
Gma13g01298 13 27433988 27444764 Gma03g01756 03 43627950 43638855 PCT