Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00607 ATGGAGGTTGGGGAAATGGACAGAAAGGAGACACAAGTTGAGGTTCCTTGGAGCCCCGGCCCACCTATTAAGCCAGTTCCTATGAAACCAGTGCCGATCTACATGCCTGAGGAGAGAAACCAAATGGATCATCTTGCAAATGGAGCAGTTGCATGTGCTGAATTTTCACTTGGCCAAGACAAAATTGGTGGGTCAGGTGATGGGTCAAATGTTGCCGGTTACAGTGGCAAAACTTGTGAACAGATAGTTTCGGATGCTGTTTCCAGCTACAGAAAACTTGGGTTCTGTGAGCAACTGTTGGCGGTTGAAGCTGAATCGAGGAACATCAGTGTGACACAAGGGAATAATGATGGATTGAAGAATCCGTTTGTTCCTCCACTCGTCCTTGATAATGTCCTAGACCCTCAGGAAACATACATTGCTTGCTGTAGCATGAAATCTTCACAGGATACCTCATATATACTTGACAATGCCAACAAAGAAGAAAGCAGACAAATAGCATCAATGCAAGTCAATATGGAAGAAAAGGATCCAGGAAGGGAAGAGAGAAATGTCACTGCCAATAAGCTTGACAATAATGTAGCGCCAAACAGCAAAGAACTCTGTGACCCTGCCATGGAATTTGCTGCTGTTTCTTCACCAGTGAAGGAGAATCACAACCCAGATAATGGAAGCAGTCATGATACTGATCTTAATAAAACACCACAACAAAAACCAAGGAGAAGAAAGCACCGTCCCAAGGTCATCAAAGAAGGCAAACCCAAAAGAACTCGGAAGCCAGCTACCCCAAAGCCTGTTCAATCAAAAGAAAAGCAACCTGTCAAGAGGAAGTATGTGAGAAAGAATGCACTGAACAAGACTTCTACTCCTCCAACAGAAGAGACTGGGGAATTGACTAAAGAAATGTCTTGTAAAAGGTCCTTAAATTTCGACATAGGAACAACATATGAAAGTTCTGCTGCCATAGAAAATACAAGAACGCTATTGGGAAAAGAAAATGGTGTTCTTGTACAAGAAACAAATGTAGGTCCTGCATTTGATCTAAACACTTCCATGAAGCAGGCATCAAACAGTTACATGTCACTACCAGAAGACACACAAGCCCTAAATACATCTTCGGGAAGAAAAAGCTCAGGGACAAAGCCAGAGGAAAACCCACCTCCGAAGAGGAAGTATGTGAAAAGGAAAGGAGTGAACAAGACTTCTGCTCCTCCAATAGAAGTTCCTGGAAATTTGACTGAAGAAACAACGTCTGCATCTGCCCAAACATCATGCACAGGGTCCATAAATTTTGATGAAAGAGCAAGTGAACAAAGTTATGCAGTCAAAGAGAATCCAACTGGGCATCCAGGCAGTGAAATTGGTGTAGTAATGAAGGAAATGAATGTGGGCCTTGCCTATGATTTAAACACTTCCATGAAGCAGGCATTAAATGATGACATGACATTACCTAAGGACACACAAGCCCCAAGTTCATCTTCAAAAATCAAACTCCCGGGGACAAAGAGAAAAGAAAACTTGACTGGCAAGAGGAAGAATGCGAGGAAAAAAGGATCGAATCCGTCTCCTATTCCTCCAACAGAAATGACAGAATTGACTGAAGCAATGATACTTGAATCTAACATGTCATGGAGAAGATCCTTAAATTTTGATATCGGAAATGTAGGCAGAGAAAATTTAGATTTGGACATTGGGAAGGAAAATATGGTGTTGGAGGAAAGAAAAGTAGGTCCCACCTATAAAGACACTTGGTTGAAAGAGGCAGTAAATATTTGCATGTCATTACCTGAGGAAACccaacacccaagtacgtctatttcaaaatgcacttcccctggggcaaagctgaatgccaactctgtagagaaaaaaaacaaaaaaggccgggcaactgcttggggtggaaacataagtaatagtcaaagttcatcaataaggttacaaatggttggctcaaagagaaaacattctgatacctttaatcgtgcagatgacagcagcatgaatctgattggagtgcaatataatggactgccctcataccaacacctaagtacgtctatttcaaaatgcacttcccctggggcaaagctgaatgccaactctgtagagaagaaaaacaaaaaaatccgggcaactgctcggggtggaaacatcagtaatagtcaaagttcatcaatagggttacaaatggttggttcaaagagaaaacattctggtacctttaatcgtgcagatgacagcagcttgaatctgattggagtgcaatataatggactgccctcataccaCACTAGCCTTTGCCTTCAGTTTCCAAAAATACAGAAGAAAAGGAGAACCGAAAAGGGGAATGCAACAAAAGAAGTCCAACTGACATGCCCTCAGGAAGATGCTCTAGGACATCCATATGCATCAAGCTCCAGCTGCTGGACTTATGGTTCTGGATATAATACAGCTAGAGTCCCAGCCACAAGTATTGATAATACTCAAACATTCAACGAGTTTCTCTTGTCTTTGAAAAGGCTGGCAGAAACATCTCAAACCTCTACTTGTGATCGTGGTTCTCTAACTAGAATTAGAAACTGTGATACTGAACCAAATTATACAGCAAAACAAGTGGGTGTCCCTGGCAAAGAAACATTTGGGGATGCAATTGGTGCTTTAGTTGCAGAGACATGTACACCACCCACAAAAAAGAGGCAGAATAGAAAGAAAAGTGTTCTTTCCAGTTCAGCACATTCTACCACAAATGAGATGCTACACCACCATAATTTTACATTGGAAAATTGCCCTCTGCCAATGGGGAAGCCATCAGACATTGTTCCTGAAGTACTATGGAACACCATGAACAATATTGATGCATTAACATTGCAATTTAGACAGCTAAACTTAAACGCAGAAGCCAGAGACCTTGCATTTCATGAGGAGAATGCACTTGTCCCTTATAAACAGAAAAACAGCCTTATCCATGGAGATGGGGTCATCGTTCCCTTTCACATTAAGAAACAGCATCTACGACCAAAGGTCAACCTTGATGATGAGACTGATAGAGTGTGGAAGCTTTTGCTGTTAGATATAAACAGTCATGGCATTGATGGAACAGATGAAGATAAGGCCAAGTGGTGGGAAGAAGAACGAAATGTGTTCCGAGGACGAGCCGACTCTTTTATTGCACGAATGCATCTTGTACAAGGAGACAGACGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTGGTTGGAGTTTTCCTCACCCAAAATGTCACTGACCATCTTTCCAGCTCTGCATTCATGTCCCTTGCTGCTCGATTTCCAAAAAATTCAAGCAGCATGTGCAAAAGACACCATAAAGAAGACACAAGGCTGGTAGTCAACGAACCACAAGTGCATATAGTGGAACCGGAAGAGAGCACAGAATGGGATGTAAAATTATTGAATCAATCTGTTTATGACCAGACTTCTACAATAGATATGGCTGAACATTCTGGAGAAAAAGAAGCCGTCAACAGCAATGAATCCTGTGGAACTCCCAGCAGTGTAATTAGCTTAACAGATGAATCAAACTCCAGATTGTCAGAATTACCTCAAAAGAATATTAAGGAACACTGTAGTCCTACGAGGAGTGGAATACTTAGTGCTACAATTGAGGAAGGAGAAGAAAAATCATGTTACAATGGTGATAGGAAAGAGTTAAATGACATAGTTTCATCCCAAGGCTCTGTTTTTTCCTCTCAAATATCTGGAGATTTTTCAAATGATCAAAATCCTGAGAAAATAGGATCATGCTCAGATAGCAACTCAGAAGTAGAAGTTCTGTCCAGCACAGCAAAGTACAACCATTTTGGTAGCAACACTTCCTTCAGTAAACTCCTTGAAATGGTTAGTTCGACCAAGTTTTATGAAGATAACAGTCAAAAAAGCGAATCAATTGAAAACTCAGGAATGCTTGAAGTTAACGGCTTTGATCCTTTCAAAACAGAAGCATCAACAAGTGACTTAAAGAAAAAGGATGAAAATGGCATGAACAGATCTAGTCTTCAAACAACAGAACCTGCAGGCCAAGTTGCAATTACCCATTCTCAAAGTATTGCATCTCAAGTCCATCCTCGGGAACAAAGCAATCACCAGCAGCAAAGCTTTTTCAACATTTCTGGACAAACTCAAGATCTTATGCAGAAAGAAAGGGGGTCAGGTCTTGGTGAGCAAAAAAATGCCACGAGGAATGGAACCAATGAGATAAGTTCTGCCCCAATAAAATTAAAGACCAAGGAACAAGGAAAAGAAAAAAAGGATGATTTTAACTGGGATAGTTTAAGAATTGATGCACAGGCTAAGGCTGGCAAAAGAGAAAAGACAGAAAACACCATGGATTCTTTGGACTGGGATGCTGTGAGATGTGCAGATGTCAGTGAAATCGCTGAGACCATCAAAGAACGGGGCATGAACAACAGGCTTGCTGAACGTATTAAGAATTTCCTGAATCGACTGGTTGAAGAACATGAAAGCATTGACCTTGAATGGCTTAGAGACGTTCCACCTGACAAAGCAAAAGAATACTTGCTCAGCATAAGAGGATTGGGATTGAAAAGTGTGGAATGCGTGCGGCTTTTAACACTGCACCATCTTGCCTTCCCGGTAGACACAAATGTCGGACGTATTGCCGTACGACTGGGATGGGTGCCTCTGCAGCCACTGCCTGAGTCACTGCAGTTGCATCTCCTAGAATTGTACCCGGTGTTGGAGTCAATACAAAAATATCTCTGGCCTCGACTGTGCAAGCTAGATCAGGAAACACTATATGAGCTACATTACCAGATGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGCCCAATGAGAGCAGAATGTAGACACTTTGCTAGTGCATTTGCAAGTGCAAGGTTTGCACTGCCTGGACCAGAGCAGAAGAGTATAGTTAGCACAACTGGAAATAGTGTGATTAACCAGAACCCATCTGAAATCATCAGTCAGTTGCACTTGCCTCCACCTGAGAACACAGCCCAAGAAGATGAAATTCAACTAACAGAAGTGAGCAGACAATTGGAATCAAAATTTGAAATAAATATTTGCCAACCTATCATTGAAGAGCCCAGAACTCCAGAGCCAGAATGCTTGCAAGAATCACAAACTGATATAGAGGATGCTTTCTATGAGGATTCAAGTGAAATTCCAACCATCAATCTTAACATAGAAGAGTTCACTCTGAATTTACAAAATTACATGCAAGAAAATATGGAACTTCAAGGAGGTGAAATGTCAAAGGCATTGGTTGCTTTGAATCCACAAGCTGCTTCCATTCCTATGCCCAAGCTAAAGAATGTGGGCCGATTACGAACAGAGCATTGTGTTTATGAACTCCCAGATACGCATCCTCTTCTACAAGGGTGGGACACACGAGAGCCTGATGATCCAGGCAAATATCTTCTTGCTATATGGACTCCAGGTGAGACCGCAAATTCTATACAGCCACCAGAAAGCAATTGCAGCTCTCAAGAAGAATGTGGCCAACTCTGTAATGAGAAGGAATGTTTCTCATGCAACAGTTTCCGTGAAGCAAATTCTCAGATAGTTAGAGGGACACTCCTGATACCTTGTCGAACAGCTATGCGGGGGAGCTTTCCACTGAATGGCACCTATTTCCAAGTCAATGAGGTATTTGCTGACCATGACTCAAGTCTCAACCCAATTAGTGTGCCCCGAAGTTGGATCTGGAACCTCAACAGGCGAACAGTATATTTTGGGACCTCCGTAACAACAATATTTAAAGGTTTAACAACACAAGAAACTCAACAATGCTTTTGGAGAGGGTATATCTGTGTGCGGGGGTTTGACAGGGAAGCACGAGCACCCCGCCCTCTGATGGCTAGACTACATTTCCCAGCTAGCAAGTTGGCCGCCAAGACCAAAGAGAAAGCAAAAAAGGAGTCGAATTCAGCAAAATCACGAGCATCCAAACCAAATCCAGAACAGCCGGAATTGATTGCCAACAGAGACAAATGA 6045 0.3856 MEVGEMDRKETQVEVPWSPGPPIKPVPMKPVPIYMPEERNQMDHLANGAVACAEFSLGQDKIGGSGDGSNVAGYSGKTCEQIVSDAVSSYRKLGFCEQLLAVEAESRNISVTQGNNDGLKNPFVPPLVLDNVLDPQETYIACCSMKSSQDTSYILDNANKEESRQIASMQVNMEEKDPGREERNVTANKLDNNVAPNSKELCDPAMEFAAVSSPVKENHNPDNGSSHDTDLNKTPQQKPRRRKHRPKVIKEGKPKRTRKPATPKPVQSKEKQPVKRKYVRKNALNKTSTPPTEETGELTKEMSCKRSLNFDIGTTYESSAAIENTRTLLGKENGVLVQETNVGPAFDLNTSMKQASNSYMSLPEDTQALNTSSGRKSSGTKPEENPPPKRKYVKRKGVNKTSAPPIEVPGNLTEETTSASAQTSCTGSINFDERASEQSYAVKENPTGHPGSEIGVVMKEMNVGLAYDLNTSMKQALNDDMTLPKDTQAPSSSSKIKLPGTKRKENLTGKRKNARKKGSNPSPIPPTEMTELTEAMILESNMSWRRSLNFDIGNVGRENLDLDIGKENMVLEERKVGPTYKDTWLKEAVNICMSLPEETQHPSTSISKCTSPGAKLNANSVEKKNKKGRATAWGGNISNSQSSSIRLQMVGSKRKHSDTFNRADDSSMNLIGVQYNGLPSYQHLSTSISKCTSPGAKLNANSVEKKNKKIRATARGGNISNSQSSSIGLQMVGSKRKHSGTFNRADDSSLNLIGVQYNGLPSYHTSLCLQFPKIQKKRRTEKGNATKEVQLTCPQEDALGHPYASSSSCWTYGSGYNTARVPATSIDNTQTFNEFLLSLKRLAETSQTSTCDRGSLTRIRNCDTEPNYTAKQVGVPGKETFGDAIGALVAETCTPPTKKRQNRKKSVLSSSAHSTTNEMLHHHNFTLENCPLPMGKPSDIVPEVLWNTMNNIDALTLQFRQLNLNAEARDLAFHEENALVPYKQKNSLIHGDGVIVPFHIKKQHLRPKVNLDDETDRVWKLLLLDINSHGIDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVTDHLSSSAFMSLAARFPKNSSSMCKRHHKEDTRLVVNEPQVHIVEPEESTEWDVKLLNQSVYDQTSTIDMAEHSGEKEAVNSNESCGTPSSVISLTDESNSRLSELPQKNIKEHCSPTRSGILSATIEEGEEKSCYNGDRKELNDIVSSQGSVFSSQISGDFSNDQNPEKIGSCSDSNSEVEVLSSTAKYNHFGSNTSFSKLLEMVSSTKFYEDNSQKSESIENSGMLEVNGFDPFKTEASTSDLKKKDENGMNRSSLQTTEPAGQVAITHSQSIASQVHPREQSNHQQQSFFNISGQTQDLMQKERGSGLGEQKNATRNGTNEISSAPIKLKTKEQGKEKKDDFNWDSLRIDAQAKAGKREKTENTMDSLDWDAVRCADVSEIAETIKERGMNNRLAERIKNFLNRLVEEHESIDLEWLRDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQETLYELHYQMITFGKVFCTKSKPNCNACPMRAECRHFASAFASARFALPGPEQKSIVSTTGNSVINQNPSEIISQLHLPPPENTAQEDEIQLTEVSRQLESKFEINICQPIIEEPRTPEPECLQESQTDIEDAFYEDSSEIPTINLNIEEFTLNLQNYMQENMELQGGEMSKALVALNPQAASIPMPKLKNVGRLRTEHCVYELPDTHPLLQGWDTREPDDPGKYLLAIWTPGETANSIQPPESNCSSQEECGQLCNEKECFSCNSFREANSQIVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPISVPRSWIWNLNRRTVYFGTSVTTIFKGLTTQETQQCFWRGYICVRGFDREARAPRPLMARLHFPASKLAAKTKEKAKKESNSAKSRASKPNPEQPELIANRDK 2014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00607 2014 MobiDBLite consensus disorder prediction 1980 1995 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 1302 1354 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 481 497 - -
Gma10g00607 2014 CDD ENDO3c 1461 1579 IPR003265 GO:0006284
Gma10g00607 2014 Pfam RRM in Demeter 1874 1974 IPR028925 -
Gma10g00607 2014 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 704 1992 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gma10g00607 2014 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 136 371 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gma10g00607 2014 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 377 492 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gma10g00607 2014 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 495 692 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gma10g00607 2014 Gene3D Hypothetical protein; domain 2 1440 1535 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 1 21 - -
Gma10g00607 2014 SMART endo3end 1441 1613 IPR003265 GO:0006284
Gma10g00607 2014 MobiDBLite consensus disorder prediction 214 300 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 170 199 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 411 425 - -
Gma10g00607 2014 SMART ccc3 1614 1634 IPR003651 GO:0051539
Gma10g00607 2014 MobiDBLite consensus disorder prediction 1169 1190 - -
Gma10g00607 2014 Gene3D - 1536 1651 IPR023170 -
Gma10g00607 2014 Pfam Permuted single zf-CXXC unit 1839 1871 IPR028924 -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 366 380 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 481 529 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 1164 1190 - -
Gma10g00607 2014 SUPERFAMILY DNA-glycosylase 1051 1636 IPR011257 GO:0003824|GO:0006281
Gma10g00607 2014 MobiDBLite consensus disorder prediction 237 254 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 1396 1419 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 366 425 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 894 915 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 255 273 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 1396 1428 - -
Gma10g00607 2014 MobiDBLite consensus disorder prediction 1980 2014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00607 Gma-Chr10 6449222 6465343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00607 - - gmx:100806794 3917.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00607 10 6449222 6465343 Gma10g00607 10 6449222 6465343 ECH
Gma10g00607 10 6449222 6465343 Gma13g01298 13 27433988 27444764 GST
Gma03g01756 03 43627950 43638855 Gma10g00607 10 6449222 6465343 PCT
Gma10g00607 10 6449222 6465343 Gma03g01756 03 43627950 43638855 PCT