Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01756 ATGGAGGTTGGAGAAACAGAGAGAAACAAGCTTCAAGGGCAGGTTCCTTGGGTCCCCACCACCCCTTTGATGCCCATTCTTCCAAAACCAGGGCCGATCTGGACTCCTATGGAGGGAAACCACCTATACTCTCATTCCAATGGGTTAACAGCATGTTTTGAACCCTCCTGTTGCGCAGAGATAAACAACTGGTCTCACCCCCGGTCAGAACCTGTGGTTTTAGCCTATGGCAATGCCAAAACTCGAGTACCAATATCCTTTGATGAAATTCCCAGTTCAAGTAACGGCATTGCTGAACTTTTAACTCAGGGAGATGCTCCATCCGCATATTCAAATGCAACACATGCTGGGTTTTTTAACCAATTTGCTCATGCGTTTAATGCACAGTTCAACCCCCACCCGACCTATGCATTACTTAGCCATCAATATCATCTCTCTCGTGAGGAACCTTTTGTCAACACTGTCCATGATCAGTTCCAAGATCTTCAGGCAGGCACGTCATACTTTTCTTACTGTAGCAAGGCATTTCCCCAAATTGCCCCACATTTAGATAATGCCATTGCAGCAGAAACCAGACAAGATGCAATGACACAGATGACTATAGAAGAAAGGAACCGAGAGGGAGAAGAGAAAAATGTCCCAGCAGCAAAGTGCAATAATCCACACAGCAAACTCTATGACCCTGTTACAGAAATTGCTGCTGTATCTACACCACACAAGGAGAATCACAACCACAAGGAAATAAGCCATGATTTTGATCTGAATAAAACACCTCAACCAAAACCAAGAAGAAGAAAGCACCGCCCCAAGGTCATAAAAGAAGGCAAATCCAAAAGAACTAGCAAGCAAGTCAATGCAGAGGTTCTGTCAAAAGAAAAGCTAACTGACAAGAGAAAGGCAAGGAGGAAAGGATTGAACACAACTTCTACTCCTCAAACAGAAATGACAGGAGAATGGACAAAACCATTGATGCCTGAATCTGCCAAAAAGACATGTAGAAGGTCTTTGAATTTTGACATTGGAGAACCAAGAGATGACAATTCTGCATATGGAGAAACTATGCACTTTGGCAGAGACACCAGTGTGGTGATTGAAGAAACACGGGCTTGGATGATTGCCCACAATGGACATGAAAAGAGTGCAAAAACACTATCAAAATCAGTAGCACAATCAAGTCCAAATGACTTGAACAGCACAGGGTCAGGATTACATATAGTTGGTTCCAAAAGAAAACAATCTGGTATTGAACAGGTAGATAATAGCAGCATTAACCAGATTGGAGCACAATACAATGCTGTGCAGGCATACTGCCAAAAGTATTCGGTTCAATTTCCAAATGTTCAGAAGAAAAGGAGAAGTGAAAAGGGGAGAATTTCAAAGGCATCCCATAAATCTTCCATGACTGCCACAAAAGATGTACGACTGGCAACATGCCCACAAGAAGATGCTAGATCACATTCTTATGCATCAAGTCTCAACTGCTGGGCTTCTTCTGAATATAATGCAGCTGGGGTCTCTGTAATTACAGATACAGAAAGAGCTATTCATGATAAACCTCAATCATTAGAGTACAACTTATCTTTAGGGCAGAGGAGGCCAACCAAAAGAAGATCAAGAGTCCCTACTAGAATTCATGATTGTTCTTTACTGACCATAACCAGAAACTCTGATACCAAACTAGCACTTACTGCAAAAGAAACATGCAGTTCTGACAGACAAACATCTGGGGATGCAAAAAGACCACAGACATGCATTGATGCTTTAGTTGCAGAGATGCGAGGATCACTCACAAAAAAGAAACGAACTAGGAAGAGAAGTATTCCTGTCAATTCAAAATATTCCTGCACAAATGAAATGCAACAGCACCATAAAGTTGTGATTGATGCAGGTGTTGCTTGTGAAGACATATGGAAAAACATACATACTGTGGACACTTTAACCGAGCAATTTGAACGTCTAAACATATACAGAGAAGCCAGAGAGATTGTGTTGCATGGGCAAAATATGCTTGTCCCTTATAACCAGCAAAATCAGAAGAACAAGCGTCTTGTCCATGAATACGGCACCATCATTCCGTTCGAGGGCCCATTTGATCCCATAAGAAAACAGCGCCCACGACCTAAAGTTGACCTTGATGAGGAGACTAATAGAGTGTGGAAGCTTCTAATGTTGGATATAAACAGTCATGGGATCAATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAGATGAACGAAATGTGTTCCGTGGACGAGCAGAATCATTTATTGCACGGATGCATCTTGTACAAGGAGACAGACGCTTTTCTCCATGGAAAGGATCAGTTGTGGATTCTGTTATTGGAGTTTTCCTCACTCAAAATGTCTCGGACCATCTTTCCAGTTCTGCATTCATGTCCCTGGCTGCTCGATTTCCTCTAAGGTCAAGTAGTAACTACAAAACATGCCCCGAGGAAAGCACAAGTTTGGTAATCAATGAGCCACAAGTGATCATTGTGGAGCCAGAAGAAAATGAAAAACTGGATGAGAAAATATCGGATCAATCTGTTTGTGAATTGAATTCTATGACAATAGACATCATTGAGCATTCTGAAGAAAGAGAAGTTGTTGACTGGAACAATTCCTGCAGAACTAATGGCGGCTTAATTGGTGTAGCAGATGAATCAAACAGCAAATTGCTGGAATCAGCTCAAAGACATAACAGTGAACATAGTCCAGTGGAGAGTGGAGCAATTAGTGCTGTGACTGGGGAAGGGCCAAAAAATTTATGTCATGGGAGTCTTGGGAAAGAGTTAAATGGCGTATTTTCATCCCAATGCTCTGCCATTACATCTCAAATATCAGGAGGTTTTTCAATTGATCAAAATCCTGAAAAGATAGGATCATTCTCAGATAGCAACTCAGAAATAGAAGACCTGTCTAGCGCTGCCAAGTACAATAGTTATTATAATAGAATTTCTTTCAGTGAGCTTTTAGAAATGGCAAGTTCAACCATGTTGCATGAAGTTAACAGTCAAAGAAGCAAATCAACTGAGAACTTAGGAGATACATGTGATCAGTCTATAGACATGAAGCATGACAACCTGGCAGAAAACTTGGAAAAATCGGATGTTACTCAAGGCTCCGCAGAAGCACCCATCACCAATGGATATACTTTTAAAATAACCCCAAACTCAGGAGTACTTGAGGTTAACTGTTATGATCCTCTCAAAATAGAAGTCCCATCAAGTGGCTCCTCAAAGGGTAAAGATGAGAATGACAATAGATCTAGTTTCCCAACAGAGTCTGACTGCCAGGCTGCAATTGTCCATTCTCAAGGTATGCTATCTCAATCCCATCCTCAGCAACAAAGTAATCATGAGCAGCATAACGTTTTCCACATTTCAGGACAAACTGAAGATCCAATGCAGAAAGCAAGGGGACTAGATTTTGGTAGGAATGAAAGCAGTAAGATAGATTCTTCCCCTGTAAAATTAAGGAGCAGGGAGCATGGAAAAGAGAAAAAGAATAACTTTGATTGGGATAGTTTAAGAATACAAGCAGAAGCTAAGGCAGGGAAAAGAGAAAAGACAGAGAACACCATGGACTCCTTGGACTGGGATGCTGTTAGACGCGCAGATGTCAGTGAAATTGCCAATGCAATCAAAGAAAGGGGCATGAACAACATGCTTGCTGAACGTATTCAGAGTTTCCTGAATCTATTGGTTGACAAGCATGGGGGCATCGATCTTGAGTGGCTGAGAGATGTTCCACCTGATCAAGCAAAAGAATTCTTGCTCAGCATAAGGGGATTGGGATTGAAAAGTGTGGAGTGTGTACGACTCTTAACACTACACCATCTTGCCTTTCCGGTGGACACAAATGTTGGACGTATAGCAGTAAGATTGGGATGGGTGCCTCTCCAGCCACTGCCAGAGTCACTACAGTTGCATCTTCTAGAATTGTACCCAGTGTTGGAGTCCATACAAAAATATCTCTGGCCCCGGCTCTGCAAGCTAGACCAAAGAACATTGTATGAGCTGCATTACCAGCTGATTACATTTGGAAAGGTCTTCTGTACTAAAAGCAAGCCAAATTGCAATGCTTGCCCAATGAGAGGGGAATGCAGACACTTTGCAAGTGCTTTTGCAAGTGCAAGGCTCGCCCTGCCAGGATCAGAGCAGAAGAGTATAGTTATCACAACTGGAAACAATGCAACTGAGCAGAACCCATCACTAGTCATCAATCAGCTGCCCTTGCTTCTCCCTGAAAATATAAACCAAGCAGAACTTCAACAAACAGAAGTGATCAGGCAACTAGAAGCAAAATCTGAAATCAACATCAGCCAACCTATTATTGAAGAGCCAGCAACTCCAGAGCCAGAATGCTCCCAAGTATCCGAAAATGATATAGAGGATACCTTCAATGAGGAATCATGTGAAATTCCCACCATCAAACTAGACATAGAAGAGTTCACTTTGAACTTACAAAACTATATGCAAGAAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTTGCTCTACATCCAGGTGCTGCATGCATTCCTACACCCAAGCTGAAGAATGTGAGCCGGTTGCGAACAGAGCATTATGTTTATGAACTCCCTGATTCACATCCCCTTCTGAATGGGTGGAACAAGCGAGAACCTGATGATCCAGGCAAATACCTTCTAGCTATATGGACTCCAGGGGAGACAGCAGATTCTATACAGCCACCAGAAAGCAAATGCAGCTCTCAGGAATGTGGCCGGCTCTGTAATGAGAATGAATGTTTTTCATGCAACAGTTTCCGTGAAGCAAGTTCACAGATAGTTCGAGGGACACTCCTGATACCATGTCGAACAGCTATGAGAGGGAGCTTTCCGCTAAATGGCACCTATTTTCAAGTCAACGAGGTCTTTGCAGACAATGACTCAAGTCTTAACCCAATTAGTGTTCCCCGAAGTTGGATCTGGAACCTTGATAGGCGAACAGTGTATTTTGGAACCTCCATACCATCTATATTCAAAGGTTTATCAACACGAGAAATTCAACAATGCTTTTGGAGAGGATATGTCTGCGTGCGTGGATTTGACCGGGAAAAGCGAGCACCCCGACCTCTGTTGGCTAGACTACACTTCCCGGTTAGCAGGTTGCCTAAGAATAGGGATAAGACCCAACAAGAGTCCGCATCGGCAAACTCACAAGGATTGAATTTTAAACAAAATCCAGAACAGCCAGAATTGCTTTCCAACATTCGGCAGACCGGAGGATCCTGA 5268 0.4262 MEVGETERNKLQGQVPWVPTTPLMPILPKPGPIWTPMEGNHLYSHSNGLTACFEPSCCAEINNWSHPRSEPVVLAYGNAKTRVPISFDEIPSSSNGIAELLTQGDAPSAYSNATHAGFFNQFAHAFNAQFNPHPTYALLSHQYHLSREEPFVNTVHDQFQDLQAGTSYFSYCSKAFPQIAPHLDNAIAAETRQDAMTQMTIEERNREGEEKNVPAAKCNNPHSKLYDPVTEIAAVSTPHKENHNHKEISHDFDLNKTPQPKPRRRKHRPKVIKEGKSKRTSKQVNAEVLSKEKLTDKRKARRKGLNTTSTPQTEMTGEWTKPLMPESAKKTCRRSLNFDIGEPRDDNSAYGETMHFGRDTSVVIEETRAWMIAHNGHEKSAKTLSKSVAQSSPNDLNSTGSGLHIVGSKRKQSGIEQVDNSSINQIGAQYNAVQAYCQKYSVQFPNVQKKRRSEKGRISKASHKSSMTATKDVRLATCPQEDARSHSYASSLNCWASSEYNAAGVSVITDTERAIHDKPQSLEYNLSLGQRRPTKRRSRVPTRIHDCSLLTITRNSDTKLALTAKETCSSDRQTSGDAKRPQTCIDALVAEMRGSLTKKKRTRKRSIPVNSKYSCTNEMQQHHKVVIDAGVACEDIWKNIHTVDTLTEQFERLNIYREAREIVLHGQNMLVPYNQQNQKNKRLVHEYGTIIPFEGPFDPIRKQRPRPKVDLDEETNRVWKLLMLDINSHGINGTDEDKAKWWEDERNVFRGRAESFIARMHLVQGDRRFSPWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPLRSSSNYKTCPEESTSLVINEPQVIIVEPEENEKLDEKISDQSVCELNSMTIDIIEHSEEREVVDWNNSCRTNGGLIGVADESNSKLLESAQRHNSEHSPVESGAISAVTGEGPKNLCHGSLGKELNGVFSSQCSAITSQISGGFSIDQNPEKIGSFSDSNSEIEDLSSAAKYNSYYNRISFSELLEMASSTMLHEVNSQRSKSTENLGDTCDQSIDMKHDNLAENLEKSDVTQGSAEAPITNGYTFKITPNSGVLEVNCYDPLKIEVPSSGSSKGKDENDNRSSFPTESDCQAAIVHSQGMLSQSHPQQQSNHEQHNVFHISGQTEDPMQKARGLDFGRNESSKIDSSPVKLRSREHGKEKKNNFDWDSLRIQAEAKAGKREKTENTMDSLDWDAVRRADVSEIANAIKERGMNNMLAERIQSFLNLLVDKHGGIDLEWLRDVPPDQAKEFLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGSEQKSIVITTGNNATEQNPSLVINQLPLLLPENINQAELQQTEVIRQLEAKSEINISQPIIEEPATPEPECSQVSENDIEDTFNEESCEIPTIKLDIEEFTLNLQNYMQENMELQEGEMSKALVALHPGAACIPTPKLKNVSRLRTEHYVYELPDSHPLLNGWNKREPDDPGKYLLAIWTPGETADSIQPPESKCSSQECGRLCNENECFSCNSFREASSQIVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADNDSSLNPISVPRSWIWNLDRRTVYFGTSIPSIFKGLSTREIQQCFWRGYVCVRGFDREKRAPRPLLARLHFPVSRLPKNRDKTQQESASANSQGLNFKQNPEQPELLSNIRQTGGS 1755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01756 1755 MobiDBLite consensus disorder prediction 447 471 - -
Gma03g01756 1755 PANTHER ROS1, PUTATIVE-RELATED 406 1101 - -
Gma03g01756 1755 PANTHER ROS1, PUTATIVE-RELATED 1 287 - -
Gma03g01756 1755 MobiDBLite consensus disorder prediction 204 224 - -
Gma03g01756 1755 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1147 1723 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gma03g01756 1755 SMART endo3end 1185 1351 IPR003265 GO:0006284
Gma03g01756 1755 MobiDBLite consensus disorder prediction 238 259 - -
Gma03g01756 1755 MobiDBLite consensus disorder prediction 238 318 - -
Gma03g01756 1755 MobiDBLite consensus disorder prediction 260 275 - -
Gma03g01756 1755 MobiDBLite consensus disorder prediction 1722 1755 - -
Gma03g01756 1755 CDD ENDO3c 1199 1317 IPR003265 GO:0006284
Gma03g01756 1755 SUPERFAMILY DNA-glycosylase 751 1374 IPR011257 GO:0003824|GO:0006281
Gma03g01756 1755 Gene3D - 1274 1390 IPR023170 -
Gma03g01756 1755 PANTHER ROS1, PUTATIVE-RELATED 289 349 - -
Gma03g01756 1755 Pfam RRM in Demeter 1610 1710 IPR028925 -
Gma03g01756 1755 MobiDBLite consensus disorder prediction 1131 1167 - -
Gma03g01756 1755 MobiDBLite consensus disorder prediction 276 303 - -
Gma03g01756 1755 Pfam Permuted single zf-CXXC unit 1576 1607 IPR028924 -
Gma03g01756 1755 PANTHER ROS1, PUTATIVE-RELATED 1147 1723 - -
Gma03g01756 1755 SMART ccc3 1352 1372 IPR003651 GO:0051539
Gma03g01756 1755 MobiDBLite consensus disorder prediction 1716 1755 - -
Gma03g01756 1755 MobiDBLite consensus disorder prediction 1073 1095 - -
Gma03g01756 1755 Gene3D Hypothetical protein; domain 2 1178 1273 - -
Gma03g01756 1755 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 406 1101 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gma03g01756 1755 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 289 349 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gma03g01756 1755 Coils Coil 1482 1502 - -
Gma03g01756 1755 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1 287 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gma03g01756 1755 MobiDBLite consensus disorder prediction 1139 1167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01756 Gma-Chr3 43627950 43638855 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01756 - - gmx:100787368 3400.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01756 03 43627950 43638855 Gma03g01756 03 43627950 43638855 ECH
Gma03g01756 03 43627950 43638855 Gma10g00607 10 6449222 6465343 PCT
Gma03g01756 03 43627950 43638855 Gma13g01298 13 27433988 27444764 PCT
Gma10g00607 10 6449222 6465343 Gma03g01756 03 43627950 43638855 PCT
Gma13g01298 13 27433988 27444764 Gma03g01756 03 43627950 43638855 PCT