Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01285 ATGGGCGCGTCGCTGTCTTCGAACGGTTCCAGTATCGGCCCGGGCCTCGGGGACATACCGGAGAGCTGCGTGGCGTGCGTGTTCCTCCACCTGACACCGCCGGAGATCTGCAACCTCGCCCGCCTCAACCGCGCGTTCCGCGGCGCCGCATCGTCGGACTCCGTCTGGGAGGCCAAGCTGCCGCGCAACTACCAGGATCTGCTCGATCTCGTTCCGCCGGAGCGCCACCGCAGCCTCTCGAAAAAGGACATCTTCGCGCTCCTCTCCCGACCCCTACCCTTCGACCACGGTCATAAGGTGGGTGCTGCTCTTCAGGAAGTGTGGCTGGATAGAGTCACCGGGAAGGTTTGCATGTCCATTTCGGCGAAGGCGATGACAATTAACGGAATTGATGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGTTTCACACTGTGGCATTTTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTAACGTTCCCATTTCCTGCTGATATTTATACTCTCTCCTTTAGGCTTCACCTCGGACGGTTTTCCAAAAGGCTTGGGAGGCGTGTTTGTAATTATGAACACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTTTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTTTGGATGAATCTGAGATTAATGATACATATGGCAATCATAAGCGTGGATGCTGGGTAGATTACAAGGTGGGTGAGTTTATTGTCAGTGGATCAGAGCCTACAACTCAAGTTAGATTTTCAATGAAACAAATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTGTACCTAATGATTTGAGGGAGCGCAAGAGAAGAGGCATTTTGAAATAG 897 0.5039 MGASLSSNGSSIGPGLGDIPESCVACVFLHLTPPEICNLARLNRAFRGAASSDSVWEAKLPRNYQDLLDLVPPERHRSLSKKDIFALLSRPLPFDHGHKVGAALQEVWLDRVTGKVCMSISAKAMTINGIDDRRYWNWIPTEESRFHTVAFLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFEFSTSDGQQASCECCLDESEINDTYGNHKRGCWVDYKVGEFIVSGSEPTTQVRFSMKQIDCTHSKGGLCVDSVFIVPNDLRERKRRGILK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01285 298 PANTHER F-BOX PROTEIN PP2-A15 1 296 - -
Gma13g01285 298 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Gma13g01285 298 Pfam Phloem protein 2 115 285 IPR025886 -
Gma13g01285 298 PANTHER F-BOX PROTEIN PP2-A15 1 296 - -
Gma13g01285 298 SUPERFAMILY F-box domain 14 82 IPR036047 GO:0005515
Gma13g01285 298 SMART fbox_2 19 59 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01285 Gma-Chr13 27251248 27256115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01285 - - gmx:100775493 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01285 13 27251248 27256115 Gma13g01285 13 27251248 27256115 ECH
Gma10g00595 10 6256159 6260747 Gma13g01285 13 27251248 27256115 GST
Gma03g01742 03 43513987 43517997 Gma13g01285 13 27251248 27256115 PCT
Gma13g01285 13 27251248 27256115 Gma03g01742 03 43513987 43517997 PCT