Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01742 ATGGGGGCCTCGCTGTCGAACCTGGGAAGCAACGGTTCGGCCGCCGCTCCGGGCCTCGGCGACATCCCGGAGAATTGCGTCGCTCGCGTCTTTCTCCACCTCACTCCTCCGGAGATTTGCAACCTCGCGCGCCTCAACCGCGCCTTTCGCGGCGCCGCCTCCGCGGATTCCGTGTGGCAGACGAAGCTGCCTCGCAACTACCAAGATCTGCTCGATTTAATGCCTCCCGAGAGGCACCGGAATCTCTCCAAGAAGGACATCTTCGCGCTGCTCTCTCGCGCAGTGCCCTTTGATGACGGCAACAAGGAAGTGTGGCTGGATAGGGTTACCGGAAGAGTTTGCATGTCAATTTCGGCGAAGGCGATGTCTATTACTGGAATTGATGACCGCAGATACTGGACTTGGGTTCCTACTGAAGAATCTAGGTTCAACACTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGTTCAGCTTCCCTTTTCCTGCTGATATTTATACTCTCTCCTTTAGGCTTCACCTTGGACGATTTTCCAAGAGGCTTGGTCGACGTGTCTGCAGTTATGAACATACCCATGGTTGGGATATAAAACCAGTGAGATTTGAGTTGTCAACCATGGATGGTCAGCAAGCATCATCTGAGTGCTACTTGGATGAAACTGAACCTGATGATTTACACGGCAATCACAAGCGTGGACATTGGGTAGATTACAAGGTGGGTGAGTTTATCGTCAGTGGATCAGAACCTACAACTAAAGTAAGATTCTCCATGAAACAGATTGATTGTACACACTCTAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCGAGGGATTTGAGAGAGCGCAAGAGAAGTGGCATTCTGAAATAA 888 0.5011 MGASLSNLGSNGSAAAPGLGDIPENCVARVFLHLTPPEICNLARLNRAFRGAASADSVWQTKLPRNYQDLLDLMPPERHRNLSKKDIFALLSRAVPFDDGNKEVWLDRVTGRVCMSISAKAMSITGIDDRRYWTWVPTEESRFNTVAYLQQIWWFEVDGEFSFPFPADIYTLSFRLHLGRFSKRLGRRVCSYEHTHGWDIKPVRFELSTMDGQQASSECYLDETEPDDLHGNHKRGHWVDYKVGEFIVSGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPRDLRERKRSGILK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01742 295 PANTHER F-BOX PROTEIN PP2-A15 1 290 - -
Gma03g01742 295 Gene3D - 14 110 - -
Gma03g01742 295 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 290 - -
Gma03g01742 295 SMART fbox_2 22 62 IPR001810 GO:0005515
Gma03g01742 295 SUPERFAMILY F-box domain 15 88 IPR036047 GO:0005515
Gma03g01742 295 Pfam Phloem protein 2 113 282 IPR025886 -
Gma03g01742 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01742 Gma-Chr3 43513987 43517997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01742 - - gmx:100807328 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01742 03 43513987 43517997 Gma03g01742 03 43513987 43517997 ECH
Gma03g01742 03 43513987 43517997 Gma10g00595 10 6256159 6260747 PCT
Gma03g01742 03 43513987 43517997 Gma13g01285 13 27251248 27256115 PCT
Gma10g00595 10 6256159 6260747 Gma03g01742 03 43513987 43517997 PCT
Gma13g01285 13 27251248 27256115 Gma03g01742 03 43513987 43517997 PCT