Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00595 ATGGGCGCGTCGCTGTCGTCGAACGGTTCGAGCATCGGCCCGGGCCTCGGGGACATACCGGAGAGCTGCGTGGCGTGTGTGTTCCTCCACCTGACGCCGCCGGAGATCTGCAACCTCGCCCGCCTCAACCGCGCCTTTCGCGGCGCCGCCTCGTCGGACTCTGTCTGGGAGGCGAAGCTGCCGCGCAACTACCAGGATCTGCTAGATCTCGTGCCGCCGCCGGAGCGCCATCACCGCAGCCTCTCGAAAAAGGACATATTCGCGCTCCTCTCCCGCCCCCTCCCCTTCGACCACGGCCATAAGGAAGTGTGGCTGGACAGAGTCACCGGGAAGGTTTGCATGTCCATTTCGGCGAAGGCGATGGTGATTACCGGCATTGATGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGTTTCACACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTTCGTTTCCATTTCCTGCTGATATTTATACTCTCTCCTTTCGACTTCACCTTGGACGGTTTTCCAAAAGGCTAGGGCGGCGTGTTTGCAATTATGATCACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTTTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTCTGGATGAAACTGAGATTGATGATACATATGGCAATCATAAGCGTGGATACTGGGTAGATTACAAGGTGGGCGAGTTTATTGTCAGTGGATCGGAGCCTACAACTCAAGTTAGATTTTCCATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATGCTGTATTTATTGTACCTAGTGATTTGAGAGAGCGAAAGAGAAGAGGCATTTTGAAATAG 885 0.5164 MGASLSSNGSSIGPGLGDIPESCVACVFLHLTPPEICNLARLNRAFRGAASSDSVWEAKLPRNYQDLLDLVPPPERHHRSLSKKDIFALLSRPLPFDHGHKEVWLDRVTGKVCMSISAKAMVITGIDDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVSFPFPADIYTLSFRLHLGRFSKRLGRRVCNYDHTHGWDIKPVKFEFSTSDGQQASCECCLDETEIDDTYGNHKRGYWVDYKVGEFIVSGSEPTTQVRFSMKQIDCTHSKGGLCVDAVFIVPSDLRERKRRGILK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00595 294 PANTHER F-BOX PROTEIN PP2-A15 1 292 - -
Gma10g00595 294 Pfam Phloem protein 2 111 281 IPR025886 -
Gma10g00595 294 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Gma10g00595 294 SUPERFAMILY F-box domain 14 76 IPR036047 GO:0005515
Gma10g00595 294 PANTHER F-BOX PROTEIN PP2-A15 1 292 - -
Gma10g00595 294 SMART fbox_2 19 59 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00595 Gma-Chr10 6256159 6260747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00595 - - gmx:100796143 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00595 10 6256159 6260747 Gma10g00595 10 6256159 6260747 ECH
Gma10g00595 10 6256159 6260747 Gma13g01285 13 27251248 27256115 GST
Gma03g01742 03 43513987 43517997 Gma10g00595 10 6256159 6260747 PCT
Gma10g00595 10 6256159 6260747 Gma03g01742 03 43513987 43517997 PCT