Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01258 ATGTCTGGCCCTGTGGCCACAGTTGATAATTTGGATGGAGCACTTTCTTGTGCAGAGAGAACAAAATCTCTTGATGCCATTTCTGAAATAGACTGTTTATCTATATTTACAATCGGTGAAGCTGCTCATTCCTCTGAAGTTGCTGGATTTAGAGTAGGGGAACTCTCACTTCCTAATGGAGAATCATATTCTGGGTCCTTTCTTGGTAACATTCCAGAGGGTCAGGGTAAGTATGTATGGTCAGATGGTTGTGTATATGAGGGTGAGTGGAGACGAGGGATGAGAAATGGATATGGGAAAATACAATGGCCTTCTGGAGTAATGTATGAGGGCGAGTTCTCAGGTGGCTATATCCATGGTACAGGAGCATATATTGGCCCTGATAGTCTGACCTACAAAGGCCGGTGGCGATTAAATCTTAAACATGGGTTGGGTTATCAAGTTTATCCAAATGGAGATATCTTTGAAGGCTCTTGGATTCAAGGAGCACCGGAGGGGCCAGGCAAGTATACCTGGGCCAATGGAAATGTATATTTGGGAAATATGAAAGGTGGGAGAATGTCAGGAAAAGGAACTCTCACCTGGATAAGTGGGGACTCATTTGAAGGAAGCTGGTTAAATGGCATGATGCATGGGCTTGGGGTATATACATGGAGTGATGGAGGCTGCTATGTTGGGACTTGGACACGGGGTCTAAAAGATGGCAAAGGAACCTTCTACCCGAGAGGCAGCTGTCTTCCATCTGCACAAGAAATATATCTCAATGCATTGAGAAAAAGAGGGCTGTTGCCAGATTTGAGAAAACAGAAACAGGTACATATTCATCATGCTGCTTCGGTTGATATGGGAGATGTCAAGGTTGGTGAGAGTCAGAGATCAAATCGTGTTTCATCTGATAAGCTAGCCAAAGGAAACCTGTTAAATCTGGAACAATCTCGCAGCAAAAATATTTCTCTCGAAAGGCGCTGGAGTCTTGAAGTATCTATTGAGAAACTGATTGGGCATGATTCAAAATTAGGATCAACAGATTCTGTAGCAGAAAATGGAGATAAAGTCCCAATTTTGGAACGCGAGTATATGCAAGGTGTGTTAATAAGTGAGTTAGTTTTAAATAATAGTTTTTCATCAATGTCTAGAAGGGCAAAACAGCTTCAAAAAAAAATTGCCAAAGAAATTAAAAGACCCGGTGAAGCAATCATTAAAGGTCACAGGAGCTATGATCTGATGCTTAGTTTACAGCTTGGAATAAGGTATACTGTGGGAAAGATTACACCAATACAGAGACGAGAAGTTCGAGCATCAGATTTTGGTCCTAGAGCAAGTTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTGACACCTCCTCATCAATCAGAGGGTTTTAAATGGAAAGATTACTGCCCTATGGTATTCAGAAATTTGAGAGAGTTGTTCAAGATTGATGCTGCTGACTATATGATGTCCATTTGTGGAAACGATGCTCTGAGGGAACTTTCTTCTCCAGGGAAAAGTGGTAGTGTCTTTTTCCTGTCTCAAGATGATCGATTCATGATTAAGACACTGCGAAGATCTGAAGTAAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCACCATGTGAAGACATATGATAATACACTTATCACAAAATTTTTTGGTCTGCACAGGATTATTCCTTCAAGTGGTCAAAAGTTTCGCTTTGTCGTAATGGGAAATATGTTCTGCACAGAATTAAGGATCCATAGGAGATATGATTTGAAAGGTTCATCTCTTGGACGTTCTTCGGACAAGATAGAAATTGATGAAAACACCACTCTTAAAGATTTGGATCTGAACTACTGCTTTTACTTGGAACCATCTTGGCGGGAGTCTTTATTGAAGCAGATTGAGATTGACAGCAAGTTCTTGGAATTACAACAGATAATGGATTACAGCCTCCTTCTAGGTGTTCATTATCGAGCTCCCCAGCAGTTGCATCCATACAACCAAAGTAGAAATGCAGATGGATTGGCAATTCTTGCAGAGGAAGACCCTCTAGAGGATGAAGGATCCAACTATCCACAAGGCCTTGTTCTGGTCCCTCGAGGTGGGGATGATGATAGTGTTGTTGTAGGGTCACACATTAGGGGTAGCAGATTGCGAGCTGCTGGGGATGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAGACTACAAATCCAGCTAGGTGTGAACATGCCTGCTAGGGCAGAGCAGATTCCTGGAAAAGAGGAAGTTCAAATGTTCCATGAGGCTTACGATGTTGTACTTTACCTTGGTATAATTGACATATTGCAAGAGTACAACATGACTAAGAAGATTGAACATGCATACAAATCTATTCAGTTTGATTCATTATCTATCTCGGCGGTGGACCCAACATTCTACTCGCGTCGCTTCCTGGATTTTATTCAGAAAATGTTCCCACCACATGAAATGGCAAGATAA 2469 0.416 MSGPVATVDNLDGALSCAERTKSLDAISEIDCLSIFTIGEAAHSSEVAGFRVGELSLPNGESYSGSFLGNIPEGQGKYVWSDGCVYEGEWRRGMRNGYGKIQWPSGVMYEGEFSGGYIHGTGAYIGPDSLTYKGRWRLNLKHGLGYQVYPNGDIFEGSWIQGAPEGPGKYTWANGNVYLGNMKGGRMSGKGTLTWISGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTFYPRGSCLPSAQEIYLNALRKRGLLPDLRKQKQVHIHHAASVDMGDVKVGESQRSNRVSSDKLAKGNLLNLEQSRSKNISLERRWSLEVSIEKLIGHDSKLGSTDSVAENGDKVPILEREYMQGVLISELVLNNSFSSMSRRAKQLQKKIAKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGPRASFWMNFPKEGSQLTPPHQSEGFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKTYDNTLITKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRYDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLELQQIMDYSLLLGVHYRAPQQLHPYNQSRNADGLAILAEEDPLEDEGSNYPQGLVLVPRGGDDDSVVVGSHIRGSRLRAAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKEEVQMFHEAYDVVLYLGIIDILQEYNMTKKIEHAYKSIQFDSLSISAVDPTFYSRRFLDFIQKMFPPHEMAR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01258 822 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 491 813 IPR002498 GO:0016307|GO:0046488
Gma13g01258 822 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 402 815 IPR002498 GO:0016307|GO:0046488
Gma13g01258 822 Gene3D - 183 253 - -
Gma13g01258 822 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 58 180 - -
Gma13g01258 822 CDD PIPKc_AtPIP5K_like 405 813 - -
Gma13g01258 822 PIRSF PIP5K_plant 6 819 IPR017163 GO:0005524|GO:0016308
Gma13g01258 822 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 391 573 IPR027484 -
Gma13g01258 822 Gene3D - 138 182 - -
Gma13g01258 822 Gene3D - 92 137 - -
Gma13g01258 822 Gene3D - 52 91 - -
Gma13g01258 822 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 14 819 IPR023610 -
Gma13g01258 822 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 14 819 - -
Gma13g01258 822 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 165 242 - -
Gma13g01258 822 SMART PIPK_2 432 816 IPR002498 GO:0016307|GO:0046488
Gma13g01258 822 Gene3D - 574 815 - -
Gma13g01258 822 SUPERFAMILY SAICAR synthase-like 401 815 - -
Gma13g01258 822 Pfam MORN repeat 201 222 IPR003409 -
Gma13g01258 822 Pfam MORN repeat 155 177 IPR003409 -
Gma13g01258 822 Pfam MORN repeat 63 85 IPR003409 -
Gma13g01258 822 Pfam MORN repeat 86 106 IPR003409 -
Gma13g01258 822 Pfam MORN repeat 178 199 IPR003409 -
Gma13g01258 822 Pfam MORN repeat 109 129 IPR003409 -
Gma13g01258 822 Pfam MORN repeat 224 244 IPR003409 -
Gma13g01258 822 Pfam MORN repeat 132 153 IPR003409 -
Gma13g01258 822 SMART morn 107 128 IPR003409 -
Gma13g01258 822 SMART morn 84 105 IPR003409 -
Gma13g01258 822 SMART morn 61 82 IPR003409 -
Gma13g01258 822 SMART morn 153 174 IPR003409 -
Gma13g01258 822 SMART morn 199 220 IPR003409 -
Gma13g01258 822 SMART morn 130 151 IPR003409 -
Gma13g01258 822 SMART morn 222 243 IPR003409 -
Gma13g01258 822 SMART morn 176 197 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01258 Gma-Chr13 26887382 26895414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01258 10 816 Acyl Lipid Metabolism Gene Families AT3G09920 74.146 0.0 1249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01258 K00889 - gmx:100804387 1675.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01258 13 26887382 26895414 Gma13g01258 13 26887382 26895414 ECH
Gma10g00546 10 5610802 5623466 Gma13g01258 13 26887382 26895414 GST
Gma03g01710 03 43270648 43278661 Gma13g01258 13 26887382 26895414 PCT
Gma13g01258 13 26887382 26895414 Gma03g01710 03 43270648 43278661 PCT