Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01710 ATGTCTGGCCCCGTGACCATAGCTGATTATTCAAATGGAGGAGCACTTTCTTGTGCAGAGAGAACAAAATCTGTTGATGCGATTCCTGAATTAGACCATCTGTCAATATTGACAAATGGTGAAATTGACGGCTTTAGTGTTGGACAACTCTTACTTTTTAATGGGGAGTCATATTCTGGATCCCTTTATGGCAATGTTTCTGAAGGCCATGGAACGTACGTGTGGTGTGATGGTTGCGTATACGAGGGTGAATGGAGGAGAGGGATGAGAAATGGTTATGGAAAACTAAGATGGCCTTCAGGAGCAGTGTATGAAGGTGATTTCTCTGGTGGATATATCCATGGTACGGGCACATACATTCGTTCTGATAAATTGAAATATAAAGGTAGATGGAGGTTGAATCTTAAACATGGTTTGGGGTTTCAAGTTTATCCTAATGGAGATACCTTTGAAGGGTCTTGGATGCAAGGAACACAAGAGGGGCCTGGCAAGTATACCTGGACCAATGGAAATGTGTATGTAGGGAATATGAAAGGTGGGATAATGTCAGGAAAAGGAACTCTTACTTGGATAAATGGGGACTCATACGAAGGAAACTGGTTAAATGGCATGATGCATGGGTTTGGAGTTTATACTTGGAGTGATGGAGGATGCTATGTTGGGACTTGGACATTTGGTCTAAAAGATGGCAAAGGAACCTTTTACCCGAGAGGTAGCCGTCTTCCTTGGGTGCAAGAAATTTACCTCAGTGCCTTGAGAAAAAGAGGGTTGCTGCCAGATTTGAGAAAACAGAAACAGGTGAGAGATGTCAAGGTACCAGAGAACCATATGTCAAGTCATGTTTCATCTGATAAGTTTGCAAAAGGAAACCTGTTAAATCTGGAAGAGTCTAATAGAAGAAATGTCTCTCTCGAAAGGCGTTGGAGTCTTGAGGTGTCTATTGAGAAGGTGATTGGATATGATTCAGCATTAAGATTTGCAGAATCTGTACCAGAAAGTAGAGATGGAGAAGTTGATGCAATGATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTGTTAATAAGTGAGGTTGTGTTAAATAATATGTTTTCATCAATGTCTAGAAGGGCACGGCGACTTCAAAAAAAGCTTGTCAAAGAGATTAAAAGACCTGGTGAGGCAATCATTAAAGGTCACAGGAGTTATGATCTGATGCTCAGTTTGCAGCTTGGAATAAGGTATACTGTGGGCAAGATAACACCTATACCGACTCGAGGAGTTAGAGCATCAGATTTTGGTCCCAAAGCAAGCTTTTGGATGGATTTTCCTAAAGAAGGTTCTCAATTAACACCTACTCATCAATCAGATGATTTTAAATGGAAAGATTATTGTCCCATGGTGTTTAGAAATTTGAGAGAGCTGTTCAAGATTGATGCTGCCGATTACATGATGTCCATTTGTGGAAACGATACTCTGAGGGAACTATCTTCTCCGGGGAAAAGTGGTAGTGTCTTCTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACACTGCGAAGATCTGAAGTCAAGGTCCTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGTCATATGAAAATACACTTATCACAAAATTTTTTGGTCTGCACAGGATTAAACCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGACTTAAGGATCCATCGGAGGTTTGATTTAAAAGGTTCTTCCCTTGGAAGATCATCAGACAAGATAGAAATTGATGAGAGTACTACGCTCAAAGATTTGGATCTGAACTACAGCTTCTACCTGGAACCATCTTGGCGAGAGTCTTTACTAAAGCAGATTGAAATAGACAGCAAATTTTTGGAAGCACAGCACATTATGGATTACAGCCTTCTTCTAGGTGTTCACTATAGAGCTCCCCAGCATCTACGTTCTCACGTTTCATACAACCAAAGTAGAAGTGTGGATGGATTAGCAATGCTTGCAGAGGAAGATCCTCTAGAGGATGAAGTATTCTATCCGCAAGGCCTTGTTCTAGTTCCTCGAGGAGGAGATGATGACAGTGTTGTTGTTGGCTCACACATGAGGGGTAGCCGGTTGCGAGCTTCATCTGCTGGTGATGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATACAGCTTGGTGTGAACATGCCATCAAGGGCAGAACAGATTTCAGGAAAACAAAAACAAGAAAAGCAAATGTTTCATGAAGTGTACGATGTGGTGCTGTACCTTGGTATCATTGACATATTGCAGGACTACAACATGACTAAGAGGATTGAACATGCTTATAAATCTCTTCAGTTTGATTCATTGTCTATCTCAGCTGTGGACCCTACGTTCTATTCGCATCGCTTCCTGGAATTTATTCAGAAGGTGTTTCCACCAAATGCAACGACAGGTTAA 2457 0.4139 MSGPVTIADYSNGGALSCAERTKSVDAIPELDHLSILTNGEIDGFSVGQLLLFNGESYSGSLYGNVSEGHGTYVWCDGCVYEGEWRRGMRNGYGKLRWPSGAVYEGDFSGGYIHGTGTYIRSDKLKYKGRWRLNLKHGLGFQVYPNGDTFEGSWMQGTQEGPGKYTWTNGNVYVGNMKGGIMSGKGTLTWINGDSYEGNWLNGMMHGFGVYTWSDGGCYVGTWTFGLKDGKGTFYPRGSRLPWVQEIYLSALRKRGLLPDLRKQKQVRDVKVPENHMSSHVSSDKFAKGNLLNLEESNRRNVSLERRWSLEVSIEKVIGYDSALRFAESVPESRDGEVDAMIPILEREYMQGVLISEVVLNNMFSSMSRRARRLQKKLVKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPIPTRGVRASDFGPKASFWMDFPKEGSQLTPTHQSDDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDTLRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTDLRIHRRFDLKGSSLGRSSDKIEIDESTTLKDLDLNYSFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQHLRSHVSYNQSRSVDGLAMLAEEDPLEDEVFYPQGLVLVPRGGDDDSVVVGSHMRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAEQISGKQKQEKQMFHEVYDVVLYLGIIDILQDYNMTKRIEHAYKSLQFDSLSISAVDPTFYSHRFLEFIQKVFPPNATTG 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01710 818 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 39 814 IPR023610 -
Gma03g01710 818 SMART PIPK_2 422 812 IPR002498 GO:0016307|GO:0046488
Gma03g01710 818 SMART morn 56 77 IPR003409 -
Gma03g01710 818 SMART morn 194 215 IPR003409 -
Gma03g01710 818 SMART morn 148 169 IPR003409 -
Gma03g01710 818 SMART morn 217 238 IPR003409 -
Gma03g01710 818 SMART morn 79 100 IPR003409 -
Gma03g01710 818 SMART morn 102 123 IPR003409 -
Gma03g01710 818 SMART morn 125 146 IPR003409 -
Gma03g01710 818 SMART morn 171 192 IPR003409 -
Gma03g01710 818 Gene3D - 60 110 - -
Gma03g01710 818 Gene3D - 203 251 - -
Gma03g01710 818 Gene3D - 111 156 - -
Gma03g01710 818 Gene3D - 157 202 - -
Gma03g01710 818 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 392 811 IPR002498 GO:0016307|GO:0046488
Gma03g01710 818 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 39 814 - -
Gma03g01710 818 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 381 563 IPR027484 -
Gma03g01710 818 PIRSF PIP5K_plant 16 815 IPR017163 GO:0005524|GO:0016308
Gma03g01710 818 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 54 180 - -
Gma03g01710 818 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 481 809 IPR002498 GO:0016307|GO:0046488
Gma03g01710 818 Pfam MORN repeat 219 240 IPR003409 -
Gma03g01710 818 Pfam MORN repeat 58 80 IPR003409 -
Gma03g01710 818 Pfam MORN repeat 173 194 IPR003409 -
Gma03g01710 818 Pfam MORN repeat 127 149 IPR003409 -
Gma03g01710 818 Pfam MORN repeat 81 102 IPR003409 -
Gma03g01710 818 Pfam MORN repeat 196 217 IPR003409 -
Gma03g01710 818 Pfam MORN repeat 150 172 IPR003409 -
Gma03g01710 818 Pfam MORN repeat 104 123 IPR003409 -
Gma03g01710 818 Gene3D - 564 811 - -
Gma03g01710 818 CDD PIPKc_AtPIP5K_like 395 810 - -
Gma03g01710 818 SUPERFAMILY SAICAR synthase-like 391 811 - -
Gma03g01710 818 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 167 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01710 Gma-Chr3 43270648 43278661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01710 14 814 Acyl Lipid Metabolism Gene Families AT3G09920 73.762 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01710 K00889 - gmx:100800418 1665.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01710 03 43270648 43278661 Gma03g01710 03 43270648 43278661 ECH
Gma03g01710 03 43270648 43278661 Gma10g00546 10 5610802 5623466 PCT
Gma03g01710 03 43270648 43278661 Gma13g01258 13 26887382 26895414 PCT
Gma10g00546 10 5610802 5623466 Gma03g01710 03 43270648 43278661 PCT
Gma13g01258 13 26887382 26895414 Gma03g01710 03 43270648 43278661 PCT