Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00546 ATGTCTGGCCCTGTGGCCACAGTTGATAATTTGGATGGAGCACTTTCTTGTGCAGAGAGAACAAAATCTCTTGATGCCATTTCTGAAATAGATCATTTATCTATATTTACAAACGGTGAAGCTGGTCATTCCTCTGAAGTTGCTGGATTTAGAGTAGGGGAACTCTCACTTCCTAATGGAGAATCATATTCTGGGTCCCTTCTTGGTAACATTCCAGAGGGTCAAGGTAAGTATGTATGGCCAGATGGTTGTGTATACGAGGGTGAGTGGAGACGAGGGATGAGAAATGGATATGGGAAAATACAATGGCCTTCTGGAGTAATGTATGATGGTGAGTTCTCAGGTGGCTATATCCATGGTACAGGAACATATATTGGCCCTGATAATCTGACCTACAAAGGTCGGTGGCGATTAAATGTTAAACATGGGTTGGGTTATCAAGTTTATCCAAATGGAGATATATTTGAAGGCTCTTGGATTCAAGGAACACCTGAGGGGCCAGGCAAGTATACCTGGGCCAACGGAAATGTATATTTGGGAAATATGAAAGGTGGGAGAATGTCAGGAAAAGGAACTCTCACCTGGGTAAGTGGGGACTCATTTGAAGGAAGCTGGTTAAATGGCATGATGCATGGGCTTGGGGCATATACATGGAGTGATGGAGGCTGCTATGTTGGGACTTGGACACGGGGTCTAAAAGATGGCAAAGGAACCTTCTATCCGAGAGGTAGCTGTCTTCCATCTGCACAAGAAATATATCTCAATGCATTGAGAAAAAGAGGGCTGTTGCCAGATTTGAGAAAACAGAAACAGATACATATTCATCATGCTGCTTCAGTTGATATGGGAGATGTCAAGGTTGGTGAAAGTCAGAGATCAAATCGTGTTTCATCTGATAAGCTCGCCAAAGGAAACTTGTTAAATCTGGAACAATCTCGTAGCAAAAATATTTCTCTCGAAAGGCGCTGGAGTCTTGAGGTATCTATTGAGAAAGTGATTGGGCATGATTCAAGATTAGGATCAACAGATTCTGTAGCAGAAAATGGAGATAAAGTCCCAATTTTGGAACGCGAGTATATGCAAGGTGTGTTAATAAGTGAATTAGTTTTAAATAATAGTTTTTCATCAATGTCTAGAAGGGCAAAACAGCTCCAAAAAAAACTTGCCAAAGAAATTAAAAGACCTGGTGAAGCAATCATTAAAGGTCACCGGAGCTATGATCTGATGCTTAGTTTGCAGCTCGGAATAAGGTATACTGTGGGGAAGATTACCCCAATACAGAGACGAGAAGTTCGAGCATCAGATTTTGGTCCTAGAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTGACACCTCCTCATCAATCAGAGGGTTTTAAATGGAAAGATTACTGCCCTATGGTGTTCAGAAATTTGAGAGAGTTGTTCAAGATTGATGCTGCTGACTATATGATGTCCATTTGTGGAAATGATGCTCTGAGGGAACTTTCTTCTCCAGGGAAAAGTGGTAGTGTCTTTTTCCTGTCTCAAGATGATCGATTCATGATTAAGACACTGCGAAGATCTGAAGTGAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCACCATGTGAAGACATATGATAATACACTTATCACAAAATTTTTTGGTCTGCACAGGATTATACCTTCGAGTGGTCAAAAGTTTCGCTTTGTCGTGATGGGAAATATGTTCTGCACAGAATTAAGGATCCATAGGAGATATGATTTGAAAGGTTCATCTCTTGGACGTTCTTCGGACAAGATAGAAATTGATGAAAACACCACTCTTAAAGATTTGGATCTGAACTACTGCTTTTACTTGGAACCATCTTGGCAGGAGTCTTTATTGAAGCAGATTGAGATTGACAGCAAGTTTTTGGAATTACAACAGATAATGGATTACAGCCTCCTCCTAGGTGTTCATTATCGAGCTCCCCAGCAGCTGCATCCATACAACCAAAATAGAACTGCAGATGGATTGCCAATTCTTGCAGAGGAAGACCCTCTAGAGGATGAAGGATCCAACTATCCACAAGGCCTTGTTCTGGTCCCTCGGGGTACAGATGATGATAGTGTTGTTGTAGGGTCACACATTAGGGGTAGCAGATTGCGAGCTTCGGCTGCTGGGGATGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAGACTACAAATCCAGCTAGGTGTGAACATGCCAGCGAGGGCAGAACAGATTCCAGGAAAAGAGGAAATGCAAATGTTCCATGAGGCTTATGATGTCGTACTTTACCTGGGTATAATTGACATATTGCAAGAGTACAACATGACTAAGAAGATTGAACATGCATACAAATCAATTCAGTTCGATTCATTGTCTATCTCGGCAGTGGATCCAACATTCTACTCGCGTCGCTTCCTGGATTTTATTCAGAAAGTGTTCCCACCACATGAAATGGCAGGATAA 2475 0.4178 MSGPVATVDNLDGALSCAERTKSLDAISEIDHLSIFTNGEAGHSSEVAGFRVGELSLPNGESYSGSLLGNIPEGQGKYVWPDGCVYEGEWRRGMRNGYGKIQWPSGVMYDGEFSGGYIHGTGTYIGPDNLTYKGRWRLNVKHGLGYQVYPNGDIFEGSWIQGTPEGPGKYTWANGNVYLGNMKGGRMSGKGTLTWVSGDSFEGSWLNGMMHGLGAYTWSDGGCYVGTWTRGLKDGKGTFYPRGSCLPSAQEIYLNALRKRGLLPDLRKQKQIHIHHAASVDMGDVKVGESQRSNRVSSDKLAKGNLLNLEQSRSKNISLERRWSLEVSIEKVIGHDSRLGSTDSVAENGDKVPILEREYMQGVLISELVLNNSFSSMSRRAKQLQKKLAKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGPRASFWMNFPKEGSQLTPPHQSEGFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKTYDNTLITKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRYDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWQESLLKQIEIDSKFLELQQIMDYSLLLGVHYRAPQQLHPYNQNRTADGLPILAEEDPLEDEGSNYPQGLVLVPRGTDDDSVVVGSHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKEEMQMFHEAYDVVLYLGIIDILQEYNMTKKIEHAYKSIQFDSLSISAVDPTFYSRRFLDFIQKVFPPHEMAG 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00546 824 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 14 820 IPR023610 -
Gma10g00546 824 CDD PIPKc_AtPIP5K_like 405 816 - -
Gma10g00546 824 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 391 573 IPR027484 -
Gma10g00546 824 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 58 180 - -
Gma10g00546 824 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 402 817 IPR002498 GO:0016307|GO:0046488
Gma10g00546 824 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 491 815 IPR002498 GO:0016307|GO:0046488
Gma10g00546 824 Gene3D - 574 817 - -
Gma10g00546 824 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 14 820 - -
Gma10g00546 824 SMART morn 176 197 IPR003409 -
Gma10g00546 824 SMART morn 222 243 IPR003409 -
Gma10g00546 824 SMART morn 199 220 IPR003409 -
Gma10g00546 824 SMART morn 84 105 IPR003409 -
Gma10g00546 824 SMART morn 107 128 IPR003409 -
Gma10g00546 824 SMART morn 130 151 IPR003409 -
Gma10g00546 824 SMART morn 153 174 IPR003409 -
Gma10g00546 824 SMART morn 61 82 IPR003409 -
Gma10g00546 824 SUPERFAMILY SAICAR synthase-like 401 817 - -
Gma10g00546 824 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 164 242 - -
Gma10g00546 824 Gene3D - 183 256 - -
Gma10g00546 824 Pfam MORN repeat 63 85 IPR003409 -
Gma10g00546 824 Pfam MORN repeat 155 177 IPR003409 -
Gma10g00546 824 Pfam MORN repeat 109 129 IPR003409 -
Gma10g00546 824 Pfam MORN repeat 201 222 IPR003409 -
Gma10g00546 824 Pfam MORN repeat 132 153 IPR003409 -
Gma10g00546 824 Pfam MORN repeat 178 199 IPR003409 -
Gma10g00546 824 Pfam MORN repeat 86 106 IPR003409 -
Gma10g00546 824 Pfam MORN repeat 224 244 IPR003409 -
Gma10g00546 824 Gene3D - 92 136 - -
Gma10g00546 824 Gene3D - 137 182 - -
Gma10g00546 824 Gene3D - 52 91 - -
Gma10g00546 824 PIRSF PIP5K_plant 6 821 IPR017163 GO:0005524|GO:0016308
Gma10g00546 824 SMART PIPK_2 432 818 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00546 Gma-Chr10 5610802 5623466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00546 10 818 Acyl Lipid Metabolism Gene Families AT3G09920 74.634 0.0 1259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00546 K00889 - gmx:100805371 1678.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00546 10 5610802 5623466 Gma10g00546 10 5610802 5623466 ECH
Gma10g00546 10 5610802 5623466 Gma13g01258 13 26887382 26895414 GST
Gma03g01710 03 43270648 43278661 Gma10g00546 10 5610802 5623466 PCT
Gma10g00546 10 5610802 5623466 Gma03g01710 03 43270648 43278661 PCT