Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01249 ATGTTCAAGAAAATCATGAAAGGCGGGCACAAGAAGCCCTCCAAGTCCGACGCCAGTGATCCGGCTCCGCAGCCGTACGCCGCCGCCAACTTCAGCGCTCCGGCGGCGCCCTCCGCCAATGTCGTCGTGAATTTCGTCTCCTTGACCCCCCTCACGCTCTCCTCCGGCGGCTCCGTCGAGCCGGTGCCTCCGTTCCGCGACGCGCCCGTCGCGGAACGGCAGAACCTCTTCCTCCGGAAGCTCCACGTGTGCTGCTACATCCTCGACTTCTCCGACACGCTGAAGAACGTTAGGGAGAAAGAAATCAAGCGCCAGGCGCTCATGGACCTCGTGGACTTCATCCAATCCGGCTCCGGCAAGATAAGCGAGAACTGCCAAGAAGAGATGATCAGAATGATCTCCGTCAACATTTTTCGGTGCCTCCCGCCGGCGTCGCACGAAAACACAGGCCAAGAACCCACCGATCCCGAAGAGGAGGAACCTTCCTTGGACCCTTCTTGGCCCCACCTTCAGCTCGTCTACGAGCTTCTCCTCAGATACGTGGTTTCCTCCGACACCGATACGAAAATCGCGAAACGGTACATCGACCACTCCTTTGTTCTCAAGTTGCTCGATTTGTTTGACTCTGAGGACCCACGGGAGAGGGAGTATTTGAAAACCATACTGCATCGTATATACGGGAAATTCATGGTGCATAGGCCCTTTATTAGGAAAGCTATTAACAACATTTTTTACCGCTTTATATATGAGACTGAGAGGCACTCTGGTATTGGGGAGCTTCTGGAGATTCTGGGCAGCATTATTAATGGGTTTGCCTTGCCCATGAAGGAGGAGCACAAGCTGTTTCTTGTGAGGGCGCTTCTGCCTCTGCATAAGCCGAAATCGGTGGGGATGTACCATCAGCAGTTGTCTTACTGCATTACTCAGTTTGTGGAGAAGGATTTCAAGCTCGCCGATACCGTGATTAGGGGTTTGTTGAAGTATTGGCCGGTTACCAATTGCCAGAAGGAGGTTCTCTTCCTTGGAGAACTTGAGGAGGTGCTGGAGGCCACGCAAGCCGCGGAGTTTCAACGATGCATGATTCCGCTTTTTAGACAGATTTCACGCTGCCTCAATAGCTCTCACTTTCAGGTTGCAGAACGAGCCCTCTTCTTGTGGAATAACGAGCATATTGTGAGCTTAATTGCCCAAAACAGGACTGTGATACTACCAATAATATTTCAAGCATTTGAGAAAAATATTTCGAGTCACTGGAATCAGGCGGTGCACGGACTGACCATGAATGTTCGCAAAATGTTCCTGGAAATGGACGCAGAATTGTTTGAAGAGTGCCAGCGGAAGCACGCAGAGAAAGAGGCTAAAGCCAAAGAACTAGCAGAGCAGCGGGAACTTAATTGGAAGAGACTGGCAGACGCGGCTGCACAGAATGGAGTGGAGGACATGGTCACTTAG 1452 0.5193 MFKKIMKGGHKKPSKSDASDPAPQPYAAANFSAPAAPSANVVVNFVSLTPLTLSSGGSVEPVPPFRDAPVAERQNLFLRKLHVCCYILDFSDTLKNVREKEIKRQALMDLVDFIQSGSGKISENCQEEMIRMISVNIFRCLPPASHENTGQEPTDPEEEEPSLDPSWPHLQLVYELLLRYVVSSDTDTKIAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVGMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMIPLFRQISRCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVILPIIFQAFEKNISSHWNQAVHGLTMNVRKMFLEMDAELFEECQRKHAEKEAKAKELAEQRELNWKRLADAAAQNGVEDMVT 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01249 483 Coils Coil 441 461 - -
Gma13g01249 483 MobiDBLite consensus disorder prediction 145 164 - -
Gma13g01249 483 PIRSF PP2A_B56 6 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma13g01249 483 SUPERFAMILY ARM repeat 74 455 IPR016024 -
Gma13g01249 483 MobiDBLite consensus disorder prediction 1 25 - -
Gma13g01249 483 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 478 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma13g01249 483 Gene3D - 69 472 IPR011989 -
Gma13g01249 483 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 478 - -
Gma13g01249 483 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 63 473 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01249 Gma-Chr13 26800747 26808715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01249 K11584 - gmx:100814538 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01249 13 26800747 26808715 Gma13g01249 13 26800747 26808715 ECH
Gma10g00535 10 5521990 5529229 Gma13g01249 13 26800747 26808715 GST
Gma19g01753 19 46836829 46843312 Gma13g01249 13 26800747 26808715 PCT
Gma03g01700 03 43180744 43186282 Gma13g01249 13 26800747 26808715 PCT
Gma13g01249 13 26800747 26808715 Gma19g01753 19 46836829 46843312 PCT
Gma13g01249 13 26800747 26808715 Gma03g01700 03 43180744 43186282 PCT