Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01700 ATGTTCAAGCGAATCATGAAGGGAGGGCAGAAGAAGCCCTCCAAGACGGACCCGAGCGATCCGTCGCCCTTGGCTCCGGCGGCGGCGGGTGCGGCAGCCGCTCCGGCGCTGGTGGTTCCTCCGCCGTCGGGCACCATAGAGCCTCTGCCTCTCTTCCGCGACGTGGCGGTCTCGGAGCGGCAGAACCTCTTCATCCGGAAGCTCCAGATATGCTGCCACGTGTTGGACTTCTCCGACACGCTGAAATCCGTTCGGGAGAAGGAAATCAAGAGACAGACTCTAATGGAGCTCGTGGATTTCATCCAATCCGGGTCGGGGAAGATAACGGAGACTTGCCAGGAAGAGATGATCAAAATGGTGTCGGCGAACGTTTTCCGGTGCCTCCCGCCGGCTTCGCACGAGAACACCGGCCAGGAAGCCACCGATCCGGAAGAGGAGGAGCCGTGCCTCGAACCAGCGTGGCCGCACTTACAACTCGTCTACGAGCTTCTCCTCAGATACGTGGTTTCCTCCGACACTGACACAAAGGTCGCAAAACGATATATTGATCATTCTTTTGTTCTCAAACTCCTTGATTTGTTTGACTCCGAGGACCCTCGTGAGCGCGAGTATTTGAAAACCATATTGCACCGTGTGTATGGGAAATTCATGGTTCATCGTCCCTTCATTAGGAAGGGCATTAACAACATATTTTTTCGGTTTATATATGAGACTGAGCGGCATAGTGGTATTGGGGAGCTTCTTGAGATTCTGGGGAGTATTATTAATGGGTTTGCTTTGCCCATGAAGGAGGAGCATAAGTTGTTTCTTGCTAGGGCGCTTCTGCCTCTGCATAAGCCCAAGCCGGTTGGGGTGTACCACCAGCAGTTGTCGTATTGCATTGCGCAGTTTGTGGAGAAGGATTACAAACTCGCGGACACGGTTATTAGGGGTTTGTTGAAGTATTGGCCAGTCACTAATTGCCAGAAGGAGGTGCTCTTCCTTGGGGAACTAGAGGAGGTGCTGGAGGCCACGCAGACCGCGGAGTTCCAACGCTGCATGGTCCCTCTTTTTAGACAGGTTGCCCGCTGCCTCAATAGTTCTCACTTTCAGGTTGCAGAACGAGCTCTCTTTTTGTGGAATAATGAGCATATTGTCAGCTTAATTGCCCAAAACAGGACTGTAGTATTACCCATAATATTTGAAGCATTGGAGAAAAATATCAAGAGTCATTGGAACCAGGCTGTTCACGGCCTGACTGTGAACGTTCGGAAAATGTTCATAGAAATGGATGCCGAATTGTTTGAAGAGTGTCAGAGGCACTTAGTGAAATTACTTTACTGCCGTAACCGGCAGTGTGAATTGGATAGTTGGATAATCAGCAAGTTGAAGAAGCAGTGA 1380 0.5094 MFKRIMKGGQKKPSKTDPSDPSPLAPAAAGAAAAPALVVPPPSGTIEPLPLFRDVAVSERQNLFIRKLQICCHVLDFSDTLKSVREKEIKRQTLMELVDFIQSGSGKITETCQEEMIKMVSANVFRCLPPASHENTGQEATDPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRVYGKFMVHRPFIRKGINNIFFRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLARALLPLHKPKPVGVYHQQLSYCIAQFVEKDYKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQTAEFQRCMVPLFRQVARCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEALEKNIKSHWNQAVHGLTVNVRKMFIEMDAELFEECQRHLVKLLYCRNRQCELDSWIISKLKKQ 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01700 459 PIRSF PP2A_B56 38 445 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma03g01700 459 Gene3D - 57 446 IPR011989 -
Gma03g01700 459 SUPERFAMILY ARM repeat 61 432 IPR016024 -
Gma03g01700 459 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 435 - -
Gma03g01700 459 MobiDBLite consensus disorder prediction 1 27 - -
Gma03g01700 459 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 49 434 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma03g01700 459 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 435 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01700 Gma-Chr3 43180744 43186282 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01700 K11584 - gmx:100798308 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01700 03 43180744 43186282 Gma03g01700 03 43180744 43186282 ECH
Gma19g01753 19 46836829 46843312 Gma03g01700 03 43180744 43186282 GST
Gma03g01700 03 43180744 43186282 Gma10g00535 10 5521990 5529229 PCT
Gma03g01700 03 43180744 43186282 Gma13g01249 13 26800747 26808715 PCT
Gma10g00535 10 5521990 5529229 Gma03g01700 03 43180744 43186282 PCT
Gma13g01249 13 26800747 26808715 Gma03g01700 03 43180744 43186282 PCT