Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01088 ATGGCTTCAGATTCCAATTCAAATCTTAGAATCACCATTGAAAGCAATCCTCCAGAGTCACGCCTAGCCGAATTGAACATCAAGTATTGGCCAAAATGGGGTTGTTCTCCAGGGAAGTACCAATTGAAGTTTGATGCTGAAGAGACATGCTATTTGCTGAAAGGGAAGGTAAAGGCATATCCAAAAGGGTCATCAGAGTTTGTGGAGTTTGGTGCTGGAGATCTTGTGACCATACCAAAGGGACTCAATTGCACTTGGGATGTGTCAGTTGCCGTGGACAAGTACTACAAATTCGAGTCACCAAATTCTTCTTAA 315 0.4286 MASDSNSNLRITIESNPPESRLAELNIKYWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGAGDLVTIPKGLNCTWDVSVAVDKYYKFESPNSS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01088 104 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Gma13g01088 104 PANTHER OS04G0445200 PROTEIN 2 103 - -
Gma13g01088 104 Gene3D Jelly Rolls 2 98 IPR014710 -
Gma13g01088 104 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 2 103 - -
Gma13g01088 104 SUPERFAMILY RmlC-like cupins 22 96 IPR011051 -
Gma13g01088 104 CDD cupin_TM1112-like 30 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01088 Gma-Chr13 25003774 25004728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01088 - - gmx:100500522 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00387 10 3652856 3653775 Gma13g01088 13 25003774 25004728 GST
Gma19g01611 19 45481758 45491706 Gma13g01088 13 25003774 25004728 PCT
Gma03g01556 03 41795715 41796403 Gma13g01088 13 25003774 25004728 PCT
Gma13g01088 13 25003774 25004728 Gma19g01611 19 45481758 45491706 PCT
Gma13g01088 13 25003774 25004728 Gma03g01556 03 41795715 41796403 PCT