Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00387 ATGGCTTCAGATTCCAATTCATCAAACCTTAGAATCACCATTGAAAGCAATCCTCCCGAGTCACGCCTAGCCGAATTGAACATCAAGTATTGGCCAAAATGGGGTTGTTCTCCAGGGAAGTACCAATTGAAGTTTGATGCTGAAGAAACATGCTATTTGCTGAAAGGGAAGGTGAAGGCATATCCAAAAGGGTCATCAGAGTTTGTAGAGTTTGGTGCTGGAGACCTTGTGACCATACCAAGGGGACTCAATTGCACTTGGGATGTGTCAGTTGCTGTGGACAAGTGCTACAAATTCGAGTCATCAAATTCTTCTTCATCATCTTCTTCCTAG 333 0.4354 MASDSNSSNLRITIESNPPESRLAELNIKYWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGAGDLVTIPRGLNCTWDVSVAVDKCYKFESSNSSSSSSS 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00387 110 Pfam EutQ-like cupin domain 24 97 IPR008579 -
Gma10g00387 110 Gene3D Jelly Rolls 2 99 IPR014710 -
Gma10g00387 110 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 1 106 - -
Gma10g00387 110 SUPERFAMILY RmlC-like cupins 23 97 IPR011051 -
Gma10g00387 110 CDD cupin_TM1112-like 31 99 - -
Gma10g00387 110 PANTHER OS04G0445200 PROTEIN 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00387 Gma-Chr10 3652856 3653775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00387 - - gmx:100795642 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00387 10 3652856 3653775 Gma10g00387 10 3652856 3653775 ECH
Gma10g00387 10 3652856 3653775 Gma13g01088 13 25003774 25004728 GST
Gma19g01611 19 45481758 45491706 Gma10g00387 10 3652856 3653775 PCT
Gma03g01556 03 41795715 41796403 Gma10g00387 10 3652856 3653775 PCT
Gma10g00387 10 3652856 3653775 Gma19g01611 19 45481758 45491706 PCT
Gma10g00387 10 3652856 3653775 Gma03g01556 03 41795715 41796403 PCT