Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01556 ATGGCTGCAGATTCCAACTCAAACCTTAGAATCTCCATTGAAAGAAACCCTTCCCAGTCACGCCTTGCTGAGTTGAACATCAAGTGCTGGCCTAAGTGGGGTTGCTCTCCAGGGAAGTACCAGTTGAAGTTTGATGCAGAAGAGACATGCTACTTGGTGAAAGGGAAGGTGAAGGCATACCCAAAAGGGTCATCAGAGTTTGTGGAGTTTGGTGCTGGGGACCTTGTCACAATTCCAAAAGGACTCAGTTGCACTTGGGATGTGTCTGTTGCCGTGGATAAGTACTACAAGTTTGAATCCAATTCTTCTTCTTCTACTACTTCATCATCATCTTGTTAA 339 0.4513 MAADSNSNLRISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLVKGKVKAYPKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESNSSSSTTSSSSC 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01556 112 SUPERFAMILY RmlC-like cupins 20 96 IPR011051 -
Gma03g01556 112 Gene3D Jelly Rolls 2 98 IPR014710 -
Gma03g01556 112 PANTHER OS04G0445200 PROTEIN 2 105 - -
Gma03g01556 112 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Gma03g01556 112 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 2 105 - -
Gma03g01556 112 CDD cupin_TM1112-like 30 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01556 Gma-Chr3 41795715 41796403 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01556 - - gmx:100793722 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01556 03 41795715 41796403 Gma03g01556 03 41795715 41796403 ECH
Gma19g01611 19 45481758 45491706 Gma03g01556 03 41795715 41796403 GST
Gma03g01556 03 41795715 41796403 Gma10g00387 10 3652856 3653775 PCT
Gma03g01556 03 41795715 41796403 Gma13g01088 13 25003774 25004728 PCT
Gma10g00387 10 3652856 3653775 Gma03g01556 03 41795715 41796403 PCT
Gma13g01088 13 25003774 25004728 Gma03g01556 03 41795715 41796403 PCT