Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00845 ATGACAAGTTATTATAAAATTTCAAAAGCTTTGATTGTGCTATGTTTAAGATGTATAGTGTTGATCACACAGGCACAATCACGAACATGGTCATTTCTCCAAGCACCAAAAGAAATAACCCTTAAGCTTATTCGTGACCCCGTGACCCTTTCACTAGCCTCAACTGATTATGGCCACATAGTTCATGACAACCCTTTTGCAATATTTGCTCCATCTTCCATTAGTGACATCTCACTCTTGATAAATTTCTCAAATTCTCTGGCCATCCCTATCACCATAGCTCCTAGAGGGCAAGCCCACTCGATTCATGGACAAGCCATGACAAATGATGGGGTTGTGGTGAACATGACTGAGTTGAATGGCTTTAGAAATGGTGATGGGATTATAGTAGTGTCTGATGACACAACAGCTACAACTATTGGTCCATATGCTGACGTGGGTGGTGAACAAATTTGGATTGATGTGTTGCATGCAACACTTGAGCGTGGACTTACACCCCTCTCTTGGACTGATTACTTGTACTTATCGGTTGGTGGAACTCTCTCCAATGCTGGGATAAGTGGCCAAACCTTCAGGTTTGGTCCCCAGATTTCCAATGTTCATGAATTGGATGTTGTTACAGGGAAAGGAGACCTAGTGACATGTTCTGCGGAGAACAACTCGGAGTTATTTTACGCCGTTCTGGGAGGTTTAGGCCAATTTGGAATTATAACCAGGGCAAGAATAGCTCTTGGACCAGCACCAACGAGGGTGAAGTGGCTCCGTTTGCTTTACAACAACTTCTCTGCATTTTCTGGAGACCAAGAATACTTAATCTCAGTCAATGGAAGAAATGAGACTAATGCAGCTGATTATGTAGAAGGTTTTCTTTTGCTAAATCAGCCACCACAGGACCTTTCCTTTTATCCAGAACCTGATCATCCTCGCATAACTTCCCTTGTAACCCAATACGGCATCATCTACGTCATAGAACTTGTCAAATATTATGACAATAGTACTCAAGAACACGTTGATGAGGATGTGAATTTTTGGGTCGAGGAATTAAAGTTTGTTCCTACGTTTATGTTCGAAAAAGATGTGTCGTACGAAGAGTTCCTAAACAGGGTTCATGCTGACGAGCTTTTCCTAAGGTCACAAGGGCTTTGGGATATTCCTCATCCCTGGTTAAACCTCTTTGTTCCAGCATCTCGAATCTCGGATTTCGACGAAGGTGTGTTCAAGGGCATTATTCTCCAGCAAAATATCACTGCAGGACTTGTGATAATCTACCCCATGAACCGAACCAAgtgggatgataacatgtcagcagttacacctcatgatgatgttttctacgtcgtgtcatttcttcattcaactgggtttgataagttggaggaatttcaggctcaaaaccaacaaatattacagttctgtgcgaatgctggtattgggataaagcaatatcttccccaaaacaaaacacaggaagaatgggagaagcagtttggccccaaatggaaaactttcaaagaaagaaaagctcaatttgatcccaacagtatattgtcacctggacaggggattttcAATTAA 1575 0.3467 MTSYYKISKALIVLCLRCIVLITQAQSRTWSFLQAPKEITLKLIRDPVTLSLASTDYGHIVHDNPFAIFAPSSISDISLLINFSNSLAIPITIAPRGQAHSIHGQAMTNDGVVVNMTELNGFRNGDGIIVVSDDTTATTIGPYADVGGEQIWIDVLHATLERGLTPLSWTDYLYLSVGGTLSNAGISGQTFRFGPQISNVHELDVVTGKGDLVTCSAENNSELFYAVLGGLGQFGIITRARIALGPAPTRVKWLRLLYNNFSAFSGDQEYLISVNGRNETNAADYVEGFLLLNQPPQDLSFYPEPDHPRITSLVTQYGIIYVIELVKYYDNSTQEHVDEDVNFWVEELKFVPTFMFEKDVSYEEFLNRVHADELFLRSQGLWDIPHPWLNLFVPASRISDFDEGVFKGIILQQNITAGLVIIYPMNRTKWDDNMSAVTPHDDVFYVVSFLHSTGFDKLEEFQAQNQQILQFCANAGIGIKQYLPQNKTQEEWEKQFGPKWKTFKERKAQFDPNSILSPGQGIFN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00845 524 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 248 523 IPR015345 GO:0009690|GO:0019139|GO:0050660
Gma13g00845 524 Gene3D - 47 523 IPR016167 -
Gma13g00845 524 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 8 524 - -
Gma13g00845 524 Gene3D - 116 249 IPR016169 -
Gma13g00845 524 ProSiteProfiles PCMH-type FAD-binding domain profile. 61 247 IPR016166 GO:0071949
Gma13g00845 524 PANTHER GULONOLACTONE OXIDASE 8 524 - -
Gma13g00845 524 Gene3D - 250 482 IPR016170 -
Gma13g00845 524 SUPERFAMILY FAD-binding/transporter-associated domain-like 43 246 IPR036318 GO:0050660
Gma13g00845 524 Pfam FAD binding domain 67 216 IPR006094 GO:0050660
Gma13g00845 524 SUPERFAMILY FAD-linked oxidases, C-terminal domain 248 524 IPR016164 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00845 Gma-Chr13 22723492 22728298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00845 K00279 - gmx:100816815 1060.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00515 17 4237023 4242413 Gma13g00845 13 22723492 22728298 GST
Gma13g00845 13 22723492 22728298 Gma15g01589 15 15498640 15523081 PCT
Gma13g00845 13 22723492 22728298 Gma09g00577 09 6237357 6241217 PCT
Gma15g01589 15 15498640 15523081 Gma13g00845 13 22723492 22728298 PCT
Gma09g00577 09 6237357 6241217 Gma13g00845 13 22723492 22728298 PCT