Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00577 ATGCCACAGAGGAATTTAGTACTATTTTCCACAACTATGGTTGTGCTATTGCTATCTAGCATAGTGCTCACACAAGCACAACCACGATCATGGTCAGCATTCCAAGCATCCAAAGAACTAGCCACAAAGCTTAGTCGTAACCCTCAAACCTTTCCACATGCCTCAACCGATTATGGGCACATAGTTCACAAAACCCCAGTGGCAATTTTCAATCCATCTTCTGTTAGTGACATCTTGGCCTTGATACATTTCTCAAACTCTCTTCCTAACCCATTCCCCATAGCCCCTAGAGGGAAAGCACACTCTGTTCATGGACAAGCCATGACAAAAGATGGGGTGGTGTTGAATATGACTAACCTCAATAGCAGTTTTCAAAATGGGTTAGGGGTTTTGGTGTCTGCTTGTGATGGAAAAGGTCCATTGATTTGTTATGCTGATGTAGGTGGTGGCCAAATGTGGATCGATGTCTTGCATGCATCCCTTGAACGTGGACTCACACCTTTGTCTTTGACTGATTATATGTATGCCACTGTTGGGGGCACACTATCTAATGCTGGCATGGGTGGCATGTCCTTTCGATTTGGACCTCAGATCTCTAATGTTCTTGAATTGGATGTTATTACAGGGAAAGGAGACCTTGTGACTTGCTCCAAGGAGCAGAACTCAGAGGCATTTTACGCTGCTCTTGGAGGATTAGGTCAATTTGGGGTGATAACAAGAGCAAGAATACCTCTAGGACCTGCACCTACTAGGGTAAAATGGCTCCGCCTGCTATACAACAACTTCACTGCATTTTCAAGAGACCAAGAACATTTAATATCGTTCAGTGAAAGGAATGACATTGCTACAGCAGATTATGTAGAAGGCATGCTTCTATTGAATCAGCCGCCACTGGATCTTCTCTTTTATCCAGCTTCTGATCATCAAAGGGTAACTTCCTTGGTAACTCAATATGGCATTATCTACATCTTGGAGCTTGCCAAATACTATTACAATAACTCTCAGGCACATGTCAATGAGGAAGTTGCATATTTGCTGAAAGGGTTAAACTTTGTACATACATTTGTGTTCGAAAGAGATGTGTCATACGAGGAGTTTGTGAACAGAGTTTATCCTTTGGAGCAAATGCTTAGGTCAGAAGGACTTTGGGAAGTTCCTCACCCTTGGCTGAACCTCTGGGTTCCAAGATCTAGAATCTCAGATTTTGATGAAGGTGTTTTCAAGGACATTGTTCTTAAGCAAAATATTACTGGCGGAAGTTTTCTAGTCTACCCAACAAACAGAAGAAACAAGTAA 1296 0.4244 MPQRNLVLFSTTMVVLLLSSIVLTQAQPRSWSAFQASKELATKLSRNPQTFPHASTDYGHIVHKTPVAIFNPSSVSDILALIHFSNSLPNPFPIAPRGKAHSVHGQAMTKDGVVLNMTNLNSSFQNGLGVLVSACDGKGPLICYADVGGGQMWIDVLHASLERGLTPLSLTDYMYATVGGTLSNAGMGGMSFRFGPQISNVLELDVITGKGDLVTCSKEQNSEAFYAALGGLGQFGVITRARIPLGPAPTRVKWLRLLYNNFTAFSRDQEHLISFSERNDIATADYVEGMLLLNQPPLDLLFYPASDHQRVTSLVTQYGIIYILELAKYYYNNSQAHVNEEVAYLLKGLNFVHTFVFERDVSYEEFVNRVYPLEQMLRSEGLWEVPHPWLNLWVPRSRISDFDEGVFKDIVLKQNITGGSFLVYPTNRRNK 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00577 431 Gene3D - 251 429 IPR016170 -
Gma09g00577 431 PANTHER GULONOLACTONE OXIDASE 11 430 - -
Gma09g00577 431 Gene3D - 49 116 IPR016167 -
Gma09g00577 431 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 249 429 IPR015345 GO:0009690|GO:0019139|GO:0050660
Gma09g00577 431 SUPERFAMILY FAD-binding/transporter-associated domain-like 44 247 IPR036318 GO:0050660
Gma09g00577 431 ProSiteProfiles PCMH-type FAD-binding domain profile. 62 248 IPR016166 GO:0071949
Gma09g00577 431 Gene3D - 117 250 IPR016169 -
Gma09g00577 431 Pfam FAD binding domain 67 217 IPR006094 GO:0050660
Gma09g00577 431 SUPERFAMILY FAD-linked oxidases, C-terminal domain 249 428 IPR016164 GO:0003824|GO:0050660
Gma09g00577 431 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 11 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00577 Gma-Chr9 6237357 6241217 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00577 K00279 - gmx:100793158 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01589 15 15498640 15523081 Gma09g00577 09 6237357 6241217 GST
Gma17g00515 17 4237023 4242413 Gma09g00577 09 6237357 6241217 PCT
Gma13g00845 13 22723492 22728298 Gma09g00577 09 6237357 6241217 PCT
Gma09g00577 09 6237357 6241217 Gma17g00515 17 4237023 4242413 PCT
Gma09g00577 09 6237357 6241217 Gma13g00845 13 22723492 22728298 PCT