Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01834 ATGGGTTCAGCGGAGAAAGAGCCACTGTTAACAGCGGAGGGAACTCGATCAAACTCAAAGCACGAGTCCTCCTCCCATGGGCAACTTGAGAGAATTCTCTCCGACGACACCCTACCCTTCCTCAACCGTGTGGGACCCGCCACCTGGATCGAGTTGAAGCTCCTCTTCTTCCTCGCCGCCCCTGCCGTCATCGTCTACCTCATCAACTACCTCATGTCCATGTCCACCCAAATCTTCTCCGGCCACCTCGGCAACCTCGAACTCGCCGCCGCCTCCCTCGGCAACACCGGCATCCAAATGTTCGCCTACGGCCTCATGTTGGGTATGGGGAGTGCCGTGGAGACGCTATGCGGACAAGCATTCGGAGCTCAAAAGTACGGGATGTTAGGAGTCTACATGCAGCGGTCAACGATTCTTCTCTCACTAGCCGGCGTAGTGTTGACCGTGATATACGTATTCAGCGAACCGATGCTAATATTCCTCGGGGAATCACCGAGAATCGCGTCGGCGGCAGCACTCTTTGTGTACGGGTTGATCCCACAGATATTCGCATACGCGGCGAACTTCCCGATCCAGAAGTTTCTCCAAGCGCAGAGCATAGTGGCACCGAGCGCGTACATATCAGCGGCGACGCTGGTGGTCCACCTGGGGATGAGTTGGGTGGCGGTGTACGAGATTGGGTTGGGGCTGTTGGGGGCGTCGCTGGTGCTGAGCCTGTCGTGGTGGATAATGGTGATTGGACAGTACGTGTACATAGTGAAGAGCGAGAGGTGCAGGCGCACGTGGCAGGGGTTCACGTGGGAGGCGTTTAGCGGTTTGTATGGGTTCTTCAAGCTCTCCGCTGCGTCCGCGGTCATGCTGTGCCTGGAGACATGGTACTTTCAGATTCTGGTTTTGCTCGCGGGGCTTCTCCCTAATCCTGAGTTGGCTCTTGATTCCCTTTCTATCTGCACCACAATTTCTGGATGGGTGTTCATGATCTCTGTTGGATTCAATGCAGCTGCAAGCGTGAGGGTGAGCAACGAACTAGGAGCAAGAAGTCCAAAATCAGCATCGTTTTCGGTGGTTGTGGTGACAGTGATTTCTTTCATAATATCAGTAATTGCAGCACTGGTGGTTCTTGCATTAAGAGATGTCATTAGCTATGCCTTCACAGGGGGTGAAGAGGTTGCTGCTGCAGTTTCAGATCTTTGTCCACTCCTTGCCCTTTCTCTTGTCCTCAATGGCATTCAACCCGTCTTATCTGGGGTGGCTGTTGGATGTGGATGGCAAGCTTTCGTAGCTTATGTAAACGTGGGTTGTTATTATGGAGTTGGCATACCATTGGGCGCGGTTCTCGGCTTTTATTTTCAATTTGGTGCCAAGGGAATATGGCTGGGAATGCTAGGTGGCACCGTTATGCAAACAATTATTCTACTGTGGGTCACATTTAGAACGGATTGGACTAAGGAGGTAGAGGAAGCAGCCAAGAGGCTGACCAAATGGGAGGACAAGAAGGAACCACTACTAAATTGA 1515 0.5267 MGSAEKEPLLTAEGTRSNSKHESSSHGQLERILSDDTLPFLNRVGPATWIELKLLFFLAAPAVIVYLINYLMSMSTQIFSGHLGNLELAAASLGNTGIQMFAYGLMLGMGSAVETLCGQAFGAQKYGMLGVYMQRSTILLSLAGVVLTVIYVFSEPMLIFLGESPRIASAAALFVYGLIPQIFAYAANFPIQKFLQAQSIVAPSAYISAATLVVHLGMSWVAVYEIGLGLLGASLVLSLSWWIMVIGQYVYIVKSERCRRTWQGFTWEAFSGLYGFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICTTISGWVFMISVGFNAAASVRVSNELGARSPKSASFSVVVVTVISFIISVIAALVVLALRDVISYAFTGGEEVAAAVSDLCPLLALSLVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYGVGIPLGAVLGFYFQFGAKGIWLGMLGGTVMQTIILLWVTFRTDWTKEVEEAAKRLTKWEDKKEPLLN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01834 504 Pfam MatE 283 444 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma12g01834 504 Pfam MatE 61 221 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma12g01834 504 CDD MATE_eukaryotic 51 487 IPR045069 GO:0042910|GO:1990961
Gma12g01834 504 Coils Coil 478 498 - -
Gma12g01834 504 PANTHER PROTEIN DETOXIFICATION 14 491 - -
Gma12g01834 504 MobiDBLite consensus disorder prediction 1 28 - -
Gma12g01834 504 TIGRFAM matE: MATE efflux family protein 61 458 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma12g01834 504 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01834 Gma-Chr12 38983538 38987886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01834 K03327 - gmx:100795338 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01834 12 38983538 38987886 Gma12g01834 12 38983538 38987886 ECH
Gma12g01834 12 38983538 38987886 Gma12g00888 12 8754735 8760893 PCT
Gma12g01834 12 38983538 38987886 Gma06g02712 06 50865310 50872582 PCT
Gma12g00888 12 8754735 8760893 Gma12g01834 12 38983538 38987886 PCT
Gma06g02712 06 50865310 50872582 Gma12g01834 12 38983538 38987886 PCT