Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02712 ATGGATTCTACATCAGTTCACAAGGACATAGATGAACCTTTGCTGGTCTCAGAAGAACCTTCATCACCACAACCACCTTCTTTTACTCAATCATTCAGCTCAAGGCATGGATCAGATGGTGAACTTGAGCGAATACTCTCAAACACCAGCGTCCCTTTCGCGAAGCGTATTGGACCGGCAACATGGGTGGAGTTGAAGTTCTTGTTTCACCTTGCTGCTCCTGCTGTTATCGTCTACCTTATCAACTATGTCATGTCTATGTCCACACAAATCTTTTCAGGCCACCTTGGTAACCTCGAACTTGCTGCTGCTTCTCTCGGAAACACTGGCATCCAAGTCTTTGCTTATGGCCTCATGTTGGGAATGGGGAGTGCAGTTGAAACACTATGTGGACAAGCATACGGTGCTAAAAAATTCAACATGTTAGGCATATACTTGCAAAGATCAACGGTGCTTCTCACACTAGCAGGCATTCTTCTAACCATCATATACATCTTCTCCGAGCCCATCTTAATCTTCCTAGGAGAATCCCCAAGAATCGCGTCGGCAGCAGCACTTTTCGTCTACGGCCTAATCCCTCAAATCTTCGCCTACGCTATAAACTTCCCAATCCAAAAATTCCTCCAAGCTCAGAGCATAGTGGCTCCAAGTGCATACATTTCAGCAGCAACGTTGTTGGTCCACCTCGTATTAAGTTATGTTGTTGTGTATAAGGTGGGGCTTGGTCTGTTGGGTGCATCTTTGGTGTTGAGTGTTTCGTGGTGGATCATTGTGATTGCGCAGTTTGTGTACATTGTGAAGAGTGAGAGGTGTAAGCACACGTGGAGAGGGTTCAGTTTTCAAGCATTTTCGGGGTTAGCAGAGTTTTTTAAGTTGTCTGCAGCTTCAGCGGTGATGCTGTGCTTAGAAACGTGGTACTTCCAAATTTTGGTTCTGCTTGCAGGATTGCTTCCTCACCCTGAGTTGGCTCTGGATTCTCTTTCTATTTGTACCACATTTTCTGGATGGGTTTTCATGATCTCAGTTGGATTTAACGCAGCTGCAAGTGTGAGAGTGAGCAATGAACTAGGGGCAAGAAATCCAAAATCAGCATCATTTTCGGTGATGGTGGTGACATTGATTTCTTTCATAATATCGGTGATTGTAGCACTTGTGGTGCTGGCAATACGAGATATCATTAGCTATGCTTTCACAGACGGTGAAGAGGTGGCTGCTGCTGTCTCAGATCTTTGTCCTCTCCTTGCTCTTTCTATTGTTCTCAATGGCATTCAGCCTGTCTTATCTGGGGTGGCTGTTGGATGTGGATGGCAAACTTTTGTTGCATATGTCAACGTTGGTTGTTATTATGGAATTGGCATACCATTGGGTTCGGTTCTCGGTTTCTATTTCAAACTCAGTGCTAAGGGAATATGGTTGGGAATGCTAGGTGGCACGGTTTTGCAAACAATTATTTTAGTGTGGGTCACATTTCGAACGGATTGGAATAATGAGGTTGAAGAAGCAGCAAAGAGGTTGAACAAGTGGGAGAACAAAACAGAGCCACTTGTGAACTGA 1554 0.4466 MDSTSVHKDIDEPLLVSEEPSSPQPPSFTQSFSSRHGSDGELERILSNTSVPFAKRIGPATWVELKFLFHLAAPAVIVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQVFAYGLMLGMGSAVETLCGQAYGAKKFNMLGIYLQRSTVLLTLAGILLTIIYIFSEPILIFLGESPRIASAAALFVYGLIPQIFAYAINFPIQKFLQAQSIVAPSAYISAATLLVHLVLSYVVVYKVGLGLLGASLVLSVSWWIIVIAQFVYIVKSERCKHTWRGFSFQAFSGLAEFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTFSGWVFMISVGFNAAASVRVSNELGARNPKSASFSVMVVTLISFIISVIVALVVLAIRDIISYAFTDGEEVAAAVSDLCPLLALSIVLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGIGIPLGSVLGFYFKLSAKGIWLGMLGGTVLQTIILVWVTFRTDWNNEVEEAAKRLNKWENKTEPLVN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02712 517 TIGRFAM matE: MATE efflux family protein 74 471 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma06g02712 517 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 505 - -
Gma06g02712 517 PANTHER PROTEIN DETOXIFICATION 19 505 - -
Gma06g02712 517 MobiDBLite consensus disorder prediction 1 15 - -
Gma06g02712 517 MobiDBLite consensus disorder prediction 21 36 - -
Gma06g02712 517 MobiDBLite consensus disorder prediction 1 38 - -
Gma06g02712 517 CDD MATE_eukaryotic 64 500 IPR045069 GO:0042910|GO:1990961
Gma06g02712 517 Pfam MatE 74 234 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma06g02712 517 Pfam MatE 296 456 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma06g02712 517 Coils Coil 491 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02712 Gma-Chr6 50865310 50872582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02712 K03327 - gmx:100790437 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02712 06 50865310 50872582 Gma06g02712 06 50865310 50872582 ECH
Gma12g00888 12 8754735 8760893 Gma06g02712 06 50865310 50872582 GST
Gma12g01834 12 38983538 38987886 Gma06g02712 06 50865310 50872582 PCT
Gma06g02712 06 50865310 50872582 Gma12g01834 12 38983538 38987886 PCT