Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01781 ATGCTAGCAGGTGCGGAACACACCACAGGCTACACTCATACATGTAAAACCCTACTCGAGAAATCACAGGCTAAGTTAGTTAACTTCACAAACATGGTAATAAGCCTCGGAAAAGATGACCCCAGACGAGTTATTCACTCCTTTAAGGTGGGATTGGCACTAATATTGATTTCTATTTTGCAATATTTTCGTCCTTCATTCTATGCTTTTGGTGACAACATAATGTGGGCGGTTCTCACCGTGGTTCTTGTCTTAGAATTTTCTGTGGGTGCAACACTTGGAAAAGGTTTAAACAGGGTGTTGGCAACGGGTTTAGCTGGTGCTTTCGGTGTTTCAATCCGTAGAATAGCTAGTTTTTCTGGGGACAAAGGAAAGGCTGTATTGACTTCAATGTTTGTCTTTTTCATAGCTGGAACAGTGACATTTATGAGATTTTCACCGAGACTGAAGGCGAGTTACGATTATGGGTTGATTATATTTATATTGACCTTCTGCTTAGTGTCTCTTTCGGATAATACTGAAAATGAATTATTAGAAGTTGCCCAAGAGAGGTTATTAACGATAATCATTGGAAGTTGTATAGCTATTGTGGTATCTATTTGCATATGCCCCGTTTGGATTGGCCAGGATCTCCATAATCAAATTGCTGGCAATATTCAAAAGCTCGCTGATTTTTTGGAAGGATTTGGAGATGAATACTTCAATAATTTAGGGAATACAGAAGAAGCTGCGGGTGATAATAAGCCATTTTTCCACAGATATGAAAGTGTCCTATCTTCAAAAGGCAGTGAAGAAACAATGGCTGTTCTCGCAAGATGGGAACCTTGTCATGGCGGGTTCAGATTTCACCACCCATGGAAGCAATACTTAAAGGTTGGAAACCAAATACGGTTGTGTGCTTACAAAATTAAAGCTCTTAGTGTCTTCCTCCTCCGCTCTGAACAGACCCCATATGAGCTACGAAACAGGATTCAAGAGCCATGCACAAACATTAGCATGGAATCTGGGATGGCCCTTAAAGAATCACTATTGATACTTAAACACATGACTAAGTCATCAATGCCAAATCCCCATGTGGCGAATGCTAAAAATGCTGCTGAATCTCTCAAATCCGTTCTAAGAACAAACCCGTGGGAAGGAGCTGATCATTTGGAGATAATACCAGCAGCTACGGTGGCATCACTTCTAATTGATATTGTGATTTGTGTTGAGAATATTTGTGAAGCTGTTGACGAACTAGCAACCCTAGCAAATTTTGTGCCGTCTGAGTTACTCCATCGAGGAACAGTGCAACCTATTTCTAATAGTGATGGTTTGGTTCATGTCATTTCCGTTGCTGAGTGA 1344 0.407 MLAGAEHTTGYTHTCKTLLEKSQAKLVNFTNMVISLGKDDPRRVIHSFKVGLALILISILQYFRPSFYAFGDNIMWAVLTVVLVLEFSVGATLGKGLNRVLATGLAGAFGVSIRRIASFSGDKGKAVLTSMFVFFIAGTVTFMRFSPRLKASYDYGLIIFILTFCLVSLSDNTENELLEVAQERLLTIIIGSCIAIVVSICICPVWIGQDLHNQIAGNIQKLADFLEGFGDEYFNNLGNTEEAAGDNKPFFHRYESVLSSKGSEETMAVLARWEPCHGGFRFHHPWKQYLKVGNQIRLCAYKIKALSVFLLRSEQTPYELRNRIQEPCTNISMESGMALKESLLILKHMTKSSMPNPHVANAKNAAESLKSVLRTNPWEGADHLEIIPAATVASLLIDIVICVENICEAVDELATLANFVPSELLHRGTVQPISNSDGLVHVISVAE 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01781 447 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 4 426 - -
Gma12g01781 447 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 426 - -
Gma12g01781 447 Pfam Aluminium activated malate transporter 35 414 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01781 Gma-Chr12 38386272 38389564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01781 36 419 Miscellaneous Gene Families AT2G27240 49.610 4.55e-129 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01781 - - gmx:100786663 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01781 12 38386272 38389564 Gma12g01781 12 38386272 38389564 ECH
Gma12g01781 12 38386272 38389564 Gma12g00841 12 7915732 7918219 PCT
Gma12g01781 12 38386272 38389564 Gma11g01457 11 15261942 15264663 PCT
Gma12g00841 12 7915732 7918219 Gma12g01781 12 38386272 38389564 PCT
Gma11g01457 11 15261942 15264663 Gma12g01781 12 38386272 38389564 PCT