Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00841 ATGGCATCTCCAAACACAAACCAGGAGAAAGCAGGGGTGCTAGGTCGAGTATTGGCCTTGCCAAAAGTTGTTAAGGGGAAGGTGTTGAGCATTTGTAGGTTAACAAAGGAGATAGCACAAGATGATCCTAGAAAAGTGATTCATTCACTAAAAGTAGGACTTGCAATCTCACTGGTTTCTCTATTCTACTACTATCAACCACTATATGAGAATTTTGGTCTTTCAGCAATGTGGGCTGTGATGACTGTAGTGGTGGTTTTTGAGTATACAGTCGGAGCCACTCTAGGAAAAGGTTTGAATAGGACAATTGCAACATTGGCTGCTGGTGCTCTTGGTGTTGGGGCTCATTACTTAGCTAGCCTATCGGGTGCAACAGGGGAACCTATATTGATTGGAGCGTTTGTCTTCGTGCAAGCTGCCATAGCATCATTCATAAGGTTTTTTCCGAAAGTGAAAGCAAGATATGACTATGGGATGCTTATATTCATCTTGACATTCTCTTTGATATCCGTGTCTGGTTTTCGAGAGGTTGAAGTGTTGGAAATGGCACACAAGAGGCTATCAACCATATTCATAGGGGGTTCTGCTTGTGTGATGATTTCCATTTTTGTTTGCCCTGTGTGGGCTGGTGAAGAATTCCACTATTCCATTGCTCACAAGTTGGAAATACTTGGCTATTTCTTGGAAGCTTTTGTACGTGTATACTTCACGATGTCAAAAGaaggagaatctgaagacaacaaaggagattctaaagacaaGTCGTTTTTAGAAGGCTATAAAACGGTTCTCAATTCCAAAAGTGTTGATGACTCTCTGGCCAATTTTGCAAAATGGGAGCCAGGTCATGGCAAGTTTAGATTTCGTCATCCTTGGGACCTATACCTCAAAGTTGGTGCTCTTTCTCGCCAATGTGCATATCGAATGGAAGCTCTAGATGCACACATCAACTCTGATATCCAAGGGTCCCAAGAAATGCGTTCCACCATCCAAGAGCAATGCTCAGAAATGTGTTTGGAAGCTAGCCAGGCCTTTAAGGAACTAGGATCATCAATCAGAACAATGACCATGCCATCATCTTCAGACACACATGTTGCAAACGCAAAAGCTGCAGTGAAGAGCCTCAAGACATTGCTCCAATCAAGTTCATGGAAAGAAACAGACCTTTTATCACTCATACCAGCTGCAACAGTGGCTTCACTACTGATTGATATAGTCGAATTCACGGAAAAAATAGCAGATTCAGTTAATAATCTTGCAACCCTCACACATTTTGAAGTTGTAGATACAGATAAATCCTCAACAAAAGCGCAACAACCATCACAATCATCTCCACACTGTGAATGTGTTGAACCGGGTCCCAAGACTGATAGCCTCCAACTCGTTATTCTAATTGAGGACTCAGCGCTAGCTGTGTCAGATAGTGAAAAATCGAACAGAGTTTGA 1446 0.4122 MASPNTNQEKAGVLGRVLALPKVVKGKVLSICRLTKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTIATLAAGALGVGAHYLASLSGATGEPILIGAFVFVQAAIASFIRFFPKVKARYDYGMLIFILTFSLISVSGFREVEVLEMAHKRLSTIFIGGSACVMISIFVCPVWAGEEFHYSIAHKLEILGYFLEAFVRVYFTMSKEGESEDNKGDSKDKSFLEGYKTVLNSKSVDDSLANFAKWEPGHGKFRFRHPWDLYLKVGALSRQCAYRMEALDAHINSDIQGSQEMRSTIQEQCSEMCLEASQAFKELGSSIRTMTMPSSSDTHVANAKAAVKSLKTLLQSSSWKETDLLSLIPAATVASLLIDIVEFTEKIADSVNNLATLTHFEVVDTDKSSTKAQQPSQSSPHCECVEPGPKTDSLQLVILIEDSALAVSDSEKSNRV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00841 481 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 10 436 - -
Gma12g00841 481 Pfam Aluminium activated malate transporter 37 420 IPR020966 GO:0015743
Gma12g00841 481 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 10 436 - -
Gma12g00841 481 MobiDBLite consensus disorder prediction 433 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00841 Gma-Chr12 7915732 7918219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00841 27 426 Miscellaneous Gene Families AT2G27240 58.750 6.12e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00841 - - gmx:100816113 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00841 12 7915732 7918219 Gma12g00841 12 7915732 7918219 ECH
Gma12g00841 12 7915732 7918219 Gma11g01457 11 15261942 15264663 GST
Gma12g01781 12 38386272 38389564 Gma12g00841 12 7915732 7918219 PCT
Gma12g00841 12 7915732 7918219 Gma12g01781 12 38386272 38389564 PCT